Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_1002 |
Symbol | |
ID | 8383275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 967548 |
End bp | 968105 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644972066 |
Product | 2'-5' RNA ligase |
Protein accession | YP_003129918 |
Protein GI | 257052085 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1514] 2'-5' RNA ligase |
TIGRFAM ID | [TIGR02258] 2'-5' RNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCAAGC GACTGTTCGT CAGCATCGAT CTTGACGGCC TCGCCGAGGC GCTCGCGGCC GTCCAGGATC GCTTCGAGGG TGCTTCGGGC CTGAACTTCG TCGATCCCGA GGGGGCCCAC GTCACGCTGA AGTTCCTCGG TGACACCGAT CCGGACCGCC TCCCCGAACT CACCGATGAA CTCACCGCGG CAGTCGAAGA GAGCGGCGTC GCCCCCTTCG AGGCCCGATT TGGTGGCCTC GGCGCGTTCC CCAGCGAGGA GTACATCACC GTCGTCTGGG TCGGCGTCCG CGAGGGCGGC CCGGCGATGA CAGCCCTCCA CGAAGCCATC GAGGACCGAA CCGTCGCGAT GGGCTTTGAC CCGGAAGACC ACGAGTTCAC GCCCCACGTC ACCATCGCCC GGATGGACCA CGCTGGCGGG AAGGAGCAGG TCCAGACCGT CCTTCGCGAG GCAGATCCGA CCGTCGGAAC CCTCGACGTT ACCGAGGTCC GCCTGACCGA GAGCGTCCTC ACCGACGGTG GCCCCGAATA TTCGACGCTC GAATCGTTCG AACTGTGA
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Protein sequence | MGKRLFVSID LDGLAEALAA VQDRFEGASG LNFVDPEGAH VTLKFLGDTD PDRLPELTDE LTAAVEESGV APFEARFGGL GAFPSEEYIT VVWVGVREGG PAMTALHEAI EDRTVAMGFD PEDHEFTPHV TIARMDHAGG KEQVQTVLRE ADPTVGTLDV TEVRLTESVL TDGGPEYSTL ESFEL
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