| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0978 |
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| Symbol | |
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| ID | 8383251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 941238 |
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| End bp | 942926 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644972042 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003129894 |
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| Protein GI | 257052061 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.121796 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCTGGC AGTTTTCGCT GGGTGTCGTG CCGTTGTTTG CCGCGACGCT GGTCGCCACA
GCCGTCGCAA TCGCTGTCTT CAGGAAGCGT GATGCGCCGG GTGGGCGTGC GCTCGGGGTG
ATCGCGGTCG CCGCCGGGTG GTGGTCGTTG CTGGCTGGCG TTGAACTCTT CCGGACTGAT
CTGTTCACGA GCGTCGTCCT GACGAAAGCC ACCTACTTCG GTATCGCTGT CGTCCCTGTC
GCCTGGGTGG TGTTCGTTCT CGCGTACACC GGACGACGAG CCTGGCTCTC GCGCTCCCGA
CTCGTTCTGC TGGGTGTTGT TCCTGTGATC ACCATGTTGG CGGCCATCAC GAACGAGCCC
TACGGGATCC ACTCGCTATT CTGGCAGGAC CTCGGATTTA TGACGGACGG TTCAGGGACT
GCTGGGTCCT CCCAGTACGG TCCGCTTTTC TGGCTCCATG CCGCGTATTC CTACTCGCTC
CTTGCGGTTG GATCGTACTT GCTTGTTGAG CTCGTCGTGA ACGCGGACCT CCTTTACCGG
GCACAGGCAG GGGTTCTTCT GATGGCTGTC GTTGCACCGT GGAGTGCGAA CGCGCTCTAT
CTCGCCAACG TGATTCAGAC GCCGTACGAT CCGACGATCC TCGGGATCGT GTTGAGTTGT
TTGCTCCTGC TCATGACCGT CTATCGCCAC CGATTTCTCG AAATCGTTCC GGCAGCCAGA
CAACTCGCTC GCACGGAGTT GATCAAGACG CTCGATGACC CGGTCGTCGT CATCGACGAC
GAGCGTCATG TGGTCGATCT GAATCCAGCG GCTGTGGACG TTTTCGCCGC CGAGCGGATG
GACGTCATCG GCCGAGGCCT CTCGGCTGTC TCCCCAAAAC TGGCTGACTG GCTCGACAGC
GACCGCGCCG AGCAAACCAT CTCCTACGAG GTCGACAACG TCGACCGGTA CTACGACATC
CAGGTGACCC CGCTCTCCCA GAAAGCGGTG GCTGATTCCG GACTACTGCT TGCACTCCGG
GACGTGACTG CTCGCCAGCA CAACCGACAG CAAGTGAGCG TCCTCAATCG GCTGCTCCGG
CACAACCTCT CGAACACTGT GACGACGATC CATGGCAACG CCGAGTACGC CGCCGAGAGG
GCCCGTGACG ACGAGGTCCG GGAGCGACTC GCCGTCATCG AGGACAACGC CGCGGCGATG
ATGGACAAAC AGGAAAAGCT CGATCGCGTC CTCAGGACCT TCGAACGCGA CAGCTACACG
TGTAAGTCCC TGGATACACT CCTGAAAGCC GTCGTCGACG ACGTCCGGAC GGCCTATCCG
GATGCCAAGC TGACGGTGGA CATGCCGGAG ACGACCATGT CTTTCGACGG GCAGGAGCGA
CTCCGGATCG CCCTTGAGGA ACTGCTGACG AACGCGATCG AACACGATCC CAGTGACGCG
CCAGCCGTGA GAGTCACCGC GACTGTCGAG GACCGACAGG CGACAATCGT CGTCACTGAC
TCCGGTCCCG GCATTCCGGC GTACGAACTC GAACCGATCA CGAACGGGCA GGAGACTCAG
CTGTCACACG GTAGTGGTGT CGGGCTCTGG CTCGTCTCCT GGATTGCACA CTCGCTGCAG
GGTTCGTTGG ACATCGAGAC TGGAGACGAT GGAACAGCGA TCACGCTGAC AATCATGTCC
GAGGAGTGA
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| Protein sequence | MVWQFSLGVV PLFAATLVAT AVAIAVFRKR DAPGGRALGV IAVAAGWWSL LAGVELFRTD
LFTSVVLTKA TYFGIAVVPV AWVVFVLAYT GRRAWLSRSR LVLLGVVPVI TMLAAITNEP
YGIHSLFWQD LGFMTDGSGT AGSSQYGPLF WLHAAYSYSL LAVGSYLLVE LVVNADLLYR
AQAGVLLMAV VAPWSANALY LANVIQTPYD PTILGIVLSC LLLLMTVYRH RFLEIVPAAR
QLARTELIKT LDDPVVVIDD ERHVVDLNPA AVDVFAAERM DVIGRGLSAV SPKLADWLDS
DRAEQTISYE VDNVDRYYDI QVTPLSQKAV ADSGLLLALR DVTARQHNRQ QVSVLNRLLR
HNLSNTVTTI HGNAEYAAER ARDDEVRERL AVIEDNAAAM MDKQEKLDRV LRTFERDSYT
CKSLDTLLKA VVDDVRTAYP DAKLTVDMPE TTMSFDGQER LRIALEELLT NAIEHDPSDA
PAVRVTATVE DRQATIVVTD SGPGIPAYEL EPITNGQETQ LSHGSGVGLW LVSWIAHSLQ
GSLDIETGDD GTAITLTIMS EE
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