Gene Huta_0954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0954 
Symbol 
ID8383227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp919129 
End bp920349 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content61% 
IMG OID644972018 
ProductCheC, inhibitor of MCP methylation 
Protein accessionYP_003129870 
Protein GI257052037 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG1776] Chemotaxis protein CheC, inhibitor of MCP methylation 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0132826 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGTCG ACATCCAGTC GCTCGGGACG TTCAACGAAC TCGCCCACGA AGGGGCAAAG 
GAGGCCACGG CATCGATGAC CCAGATGACG GGCATCGACG CCGACGTGGA CGTGACCCAG
ATCACGCTGA TGGATCGGGG CGACGTCGGC GAAACGCTGG CCGAGCAGGC GTTCGTCGGG
GTCGAATTCG ACTTCGAGGG CGAGCTATCG GGTCAGACAG CGCTGGTACT TGATCAGGAC
AGTAGCGAGA CGTTGGCGGG AACGCTGATG CCCGGCGACG AGATCAGTGC CGAAATGGCC
AAAAGCGGGG TCAAGGAGAT CGGCAACATC ATGATGAGTG GGTTCATCGA CGGCTGGGCC
GACTATCTCG AAACCACGAT CGATCACTCC CCGCCGACGT ACATCGAAGG GACCGGCAAG
GAGATCCTTC CGACGTCGGA TGATTCATCG CCCGACGATC AGGTCTTCGT GTTCAAAAGC
GAGATCGAGT GGGTCGACGA ATCAGTCGAC TTCTACATCT ACATGTTGCC GGATCAGGAC
TCGCTCACGG ACCTGATGGC GGACCACGCC GACGCCGAAG CCGACGCGAT CCCGGTCGAC
AAGCTCCACG TCTTCAACCG GATGACCCAG CAGGGCACCA AGCAGGCCGC CGAAAACGTC
TCGATGATGA CTGGAATTGA TGTCGAAGCG GAAGTCTCAC AAATCAACTT CACGCGGATC
GAAGACATCC CCAAGCAGGT CGGGACCGAC CGATACGTCG GGACGGCCGT CGAGTTCACC
GACCTCCCGA GTGGGTTCCT GCTCGTGTTG TTCGACGAGG CCTCGGCGAA GAACGCGGCC
GAGGCGCTGA TGCCCACCGC GGTCGAGGGT GAAGAACTCA CCGACCAACA CACGGCAGCC
ATCGAGGAAC TGGGGAACAT CATGACCAGC GGGTTCGTCG ACGGCTGGGC GAACGTCCTC
CAGACGTCCA TCGATCACAC GCCGCCGCGG CTGGTTCACG ACATGGGGCG GGCGATCATC
GACCCGCTTG CGGCCCAGGT CGGGCAACAT CAGGACCACG CGTTCGTCAT CGACTCGCGG
ATGCGAACGG ACGACGTCGA GTTCGAGAGC GAGATCTACG CGTTGCCCAA CGACGAGGAA
CTCCGGGAAG CACTCGAGGA ACTGGCGGTC GAACGGGCGG AAGAGACTGA CGCGGACCCC
GAAGAAATAT TCCAGGAATG A
 
Protein sequence
MNVDIQSLGT FNELAHEGAK EATASMTQMT GIDADVDVTQ ITLMDRGDVG ETLAEQAFVG 
VEFDFEGELS GQTALVLDQD SSETLAGTLM PGDEISAEMA KSGVKEIGNI MMSGFIDGWA
DYLETTIDHS PPTYIEGTGK EILPTSDDSS PDDQVFVFKS EIEWVDESVD FYIYMLPDQD
SLTDLMADHA DAEADAIPVD KLHVFNRMTQ QGTKQAAENV SMMTGIDVEA EVSQINFTRI
EDIPKQVGTD RYVGTAVEFT DLPSGFLLVL FDEASAKNAA EALMPTAVEG EELTDQHTAA
IEELGNIMTS GFVDGWANVL QTSIDHTPPR LVHDMGRAII DPLAAQVGQH QDHAFVIDSR
MRTDDVEFES EIYALPNDEE LREALEELAV ERAEETDADP EEIFQE