Gene Huta_0948 details

Gene Information

• Locus tag: Huta_0948
• ID: 8383221
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 913754
• End bp: 914380
• Gene Length: 627 bp
• Protein Length: 208 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 644972012
• Product: flagellin
• Protein accession: YP_003129864
• Protein GI: 257052031
• COG category: [N] Cell motility
• COG ID: [COG1681] Archaeal flagellins
• TIGRFAM ID: [TIGR02537] archaeal flagellin N-terminal-like domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.528347
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTCGAAC GAACCAACGA CAAACCGAAC GAGCGGGCCC AGGTCGGGAT CGGCACACTC 
ATCGTGTTCA TCGCGATGGT GCTGGTCGCC GCGATCGCCG CGGGCGTGCT GATCAACACG 
GCCGGGTTCC TGCAGAGTAG TGCCGAAGAA AGTGGTGAAC AGGCAGCCGA GCAGGTCACG 
AATCGCCTGG TCGAAGTCAA CACCGTTGGC ACAGTCGATA CCAGCCAAGA TCCGACTGTC 
GTCACGGAAG TCAAGATCAC GACCCGACTG GCGCCAGGAT CGTCCGACGT GGACCTAGAT 
GGCGTGACGA TGCAATGGGT CCAAGCAGGC GGGAGTTACA ATCTGGTGTC GGACCAGACC 
AGCGACATCA ATAACGCCGA TGGGGTATTC AGTTACGATG AGCTGCGGGA CAATGACGGC 
TCCGTCGGCA CCGACAGTAC GTTGAACAAC CGCGTCGACC GCGCAGTCAT CACTATCGGC 
CTCGATGGAT CCAATGACAA CATTGCCGGT CAGATGGAAG GTGGCGAGAC CGCCACGCTG 
ACGATCAGTA CGCAGTCCGG TGGCGAGACC ACCATCACGC TGGTCGTGCC GGACTCCCTG 
ACTGAGAAGT CCTCGGTCAA CCTGTAA 

 

Protein sequence

MFERTNDKPN ERAQVGIGTL IVFIAMVLVA AIAAGVLINT AGFLQSSAEE SGEQAAEQVT 
NRLVEVNTVG TVDTSQDPTV VTEVKITTRL APGSSDVDLD GVTMQWVQAG GSYNLVSDQT 
SDINNADGVF SYDELRDNDG SVGTDSTLNN RVDRAVITIG LDGSNDNIAG QMEGGETATL 
TISTQSGGET TITLVVPDSL TEKSSVNL