Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0931 |
Symbol | |
ID | 8383204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 897120 |
End bp | 898529 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644971995 |
Product | phosphoesterase RecJ domain protein |
Protein accession | YP_003129847 |
Protein GI | 257052014 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCACCCG TGCCGAAACT CGCCGATCGA GCCGCGGAGT GTGCCCAGCG CCTTCGAAGC GCCGATGAGG TGCTCCTGGC CTCGCACATC GATGCTGACG GATTGACGAG CGCCGGAATC GCCACGACGG CCCTTGAACG GGCGGGGATT CCAACGACAA CGGTCTTCAA GAACCAGCTC GACGACGAAG AAATCGCGTC GATCGCCGCA CGAGACTTTC AGACGGTGCT GTTCACCGAC TTCGGGAGTG GCCAACTCGA TGCGATCACG AAACACGAAC AGCAAGGGGA CTTCGAGCCG ATCGTCGTCG ACCATCACCA GCCGGCCGAC GCCGAGACGC GCTATCACCT CAATCCCCTC CTCGAAGGGA TCGACGGCGC ATCCGAACTT TCGGGGGCTG GGGCAAGTTA CCTACTCGCA CGCGCGTTGG AGGAAGACGA ACAGGACAAC CGTGACCTCG CCGCGCTCGC GGTGGTCGGC GCTGTCGGCG ACATGCAGGC AGTCGGCGGC GAGCTCGTCG GTGCGAATCG AGCGATCGTC GAGGACGGAA TGGGAGCAGG CGTCCTCGAG GAGGCGACCG ACATCGCGCT GTATGGCAAA CAGACCCGAC CGCTGCCGAA GCTGCTCGAA TACGCCGATC AACCCCAGAT TCCCGGGGTT TCGGGCGACG AAGCCGGCGC GATCGACTTC CTGGAATCGC TCGGGATCGA TCTCGAAGTG GATGACGAGT GGCGTCGATG GGTCGACCTC TCCGCGGAAG AGCGTCAGAC GGTCGTCAGC GGGCTCGTAC AGCGTGGTGT CGAGCGGGGC GTGCCGGCGG ACCGGATCGA CTCACTCGTC GGGACGAGTT ATACGCTCTC AGGAGAGGCA CAAGGCACCG AACTCCGTGA CGCAAGCGAA TTTTCGACCC TGCTCAACGC GACGGCGCGC TATGAACGTG CCGACGTGGG CTTGGCCGTC TGTCTCGGCG ACCGCGAGCA AGCCCTCGAA CGCGCCCGTC GATTGCTCGC GAACCACCGG CGGAACCTTT CGGAGGGCCT TGAGTACGTC CGCGAGAACG GCGTCGAGTC GGGCGAGACA GTCCAGTGGT TCGACGCCGA CGACGCTATC CGGGAGACGA TCGTGGGGAT CGTCGCCGGG ATGGCACTCG GACTCCCCGG CGTCGACCGC GAACGGCCGA TCGTCGCCTT CGCCCGGAAG TCCGAGGACG AGCGGAAGGT TTCGGCCCGG GGGACCGCCA CCCTCGTCCG CCAGGGGCTG GACCTCTCGG ATGCGATCCA CACGGCGAGC GTCGCGGTCG GTGGCGGTGG CGGGGGCCAC GACATCGCCG CCGGCGCAAC GATCCCGGCG GCCCGCCGAG AGGAGTTCAT CGACCGGCTC GAGAGTGCTA TCGCCGAACA ACTGGCCTGA
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Protein sequence | MAPVPKLADR AAECAQRLRS ADEVLLASHI DADGLTSAGI ATTALERAGI PTTTVFKNQL DDEEIASIAA RDFQTVLFTD FGSGQLDAIT KHEQQGDFEP IVVDHHQPAD AETRYHLNPL LEGIDGASEL SGAGASYLLA RALEEDEQDN RDLAALAVVG AVGDMQAVGG ELVGANRAIV EDGMGAGVLE EATDIALYGK QTRPLPKLLE YADQPQIPGV SGDEAGAIDF LESLGIDLEV DDEWRRWVDL SAEERQTVVS GLVQRGVERG VPADRIDSLV GTSYTLSGEA QGTELRDASE FSTLLNATAR YERADVGLAV CLGDREQALE RARRLLANHR RNLSEGLEYV RENGVESGET VQWFDADDAI RETIVGIVAG MALGLPGVDR ERPIVAFARK SEDERKVSAR GTATLVRQGL DLSDAIHTAS VAVGGGGGGH DIAAGATIPA ARREEFIDRL ESAIAEQLA
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