Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0928 |
Symbol | hemD |
ID | 8383201 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 893444 |
End bp | 894178 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644971992 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_003129844 |
Protein GI | 257052011 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.232267 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTGACG ACCGGCCGAC CGTCGCCGTC TTCCGCCCGG ACGACGAGCG ACTGGAGACG GCGGTCGAAC TCCTCGAATC GCTCGACGCG AACCCAATCG CCGACCCGAT GCTCGCCGTT GAGCCGACGG AGACGCTTCC CCGCACGGAC GCCGAGGTGG TCGTTTTCAC GAGCAAGACC GGGGCCGAAC TGGTGGCCGG CGAGTGGACG CCCGGCGACG CAACAGTGTG TGCGATCGGC GAGCCGACGG CCGCCGCACT CCGGGCGAAC GGGATCGCGG TCGACGTCGT GCCGGAGACG TACTCCTCGT CCGGACTCGT CGATGCACTC GGGGAGCAAG TCGACGGGCT GCGAGTCGAG GTCGCCCGCA GCGACCACGG CAGCGACGTG TTGCTGGACG GGCTGGAATC GGCCGGCGCG TACGTCCACG AGACGGTACT GTATCGACTC GTCCGTCCAG CGAACGCCGG CGAGTCCGTC CGGCGGGCCG CCGAAGGCGA CCTCGACGCC GCGCTGTTCA CCTCCTCGTT GACGGTCGAA CACTTTCTGG CGATCGCGAG TGAGCGAGGC CAGCGAGCGG CGGCGATCGA GGGATTGTCC GAGGCAGTCG TGGGGACGAT CGGCGGACCA ACCCGAGAGA CGGCAGCGGG ACAGGGAGTC GACGTCGATG TCGTTCCCGA AGCGGCCGAG TTCGAGGCAC TTGCCACAGC GGTCATCGAT CGGCTCGATC GATAG
|
Protein sequence | MTDDRPTVAV FRPDDERLET AVELLESLDA NPIADPMLAV EPTETLPRTD AEVVVFTSKT GAELVAGEWT PGDATVCAIG EPTAAALRAN GIAVDVVPET YSSSGLVDAL GEQVDGLRVE VARSDHGSDV LLDGLESAGA YVHETVLYRL VRPANAGESV RRAAEGDLDA ALFTSSLTVE HFLAIASERG QRAAAIEGLS EAVVGTIGGP TRETAAGQGV DVDVVPEAAE FEALATAVID RLDR
|
| |