Gene Huta_0928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0928 
SymbolhemD 
ID8383201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp893444 
End bp894178 
Gene Length735 bp 
Protein Length244 aa 
Translation table11 
GC content69% 
IMG OID644971992 
Producturoporphyrinogen-III synthase 
Protein accessionYP_003129844 
Protein GI257052011 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1587] Uroporphyrinogen-III synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.232267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGACG ACCGGCCGAC CGTCGCCGTC TTCCGCCCGG ACGACGAGCG ACTGGAGACG 
GCGGTCGAAC TCCTCGAATC GCTCGACGCG AACCCAATCG CCGACCCGAT GCTCGCCGTT
GAGCCGACGG AGACGCTTCC CCGCACGGAC GCCGAGGTGG TCGTTTTCAC GAGCAAGACC
GGGGCCGAAC TGGTGGCCGG CGAGTGGACG CCCGGCGACG CAACAGTGTG TGCGATCGGC
GAGCCGACGG CCGCCGCACT CCGGGCGAAC GGGATCGCGG TCGACGTCGT GCCGGAGACG
TACTCCTCGT CCGGACTCGT CGATGCACTC GGGGAGCAAG TCGACGGGCT GCGAGTCGAG
GTCGCCCGCA GCGACCACGG CAGCGACGTG TTGCTGGACG GGCTGGAATC GGCCGGCGCG
TACGTCCACG AGACGGTACT GTATCGACTC GTCCGTCCAG CGAACGCCGG CGAGTCCGTC
CGGCGGGCCG CCGAAGGCGA CCTCGACGCC GCGCTGTTCA CCTCCTCGTT GACGGTCGAA
CACTTTCTGG CGATCGCGAG TGAGCGAGGC CAGCGAGCGG CGGCGATCGA GGGATTGTCC
GAGGCAGTCG TGGGGACGAT CGGCGGACCA ACCCGAGAGA CGGCAGCGGG ACAGGGAGTC
GACGTCGATG TCGTTCCCGA AGCGGCCGAG TTCGAGGCAC TTGCCACAGC GGTCATCGAT
CGGCTCGATC GATAG
 
Protein sequence
MTDDRPTVAV FRPDDERLET AVELLESLDA NPIADPMLAV EPTETLPRTD AEVVVFTSKT 
GAELVAGEWT PGDATVCAIG EPTAAALRAN GIAVDVVPET YSSSGLVDAL GEQVDGLRVE
VARSDHGSDV LLDGLESAGA YVHETVLYRL VRPANAGESV RRAAEGDLDA ALFTSSLTVE
HFLAIASERG QRAAAIEGLS EAVVGTIGGP TRETAAGQGV DVDVVPEAAE FEALATAVID
RLDR