Gene Huta_0905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0905 
Symbol 
ID8383178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp873154 
End bp873906 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content66% 
IMG OID644971969 
ProductABC transporter related 
Protein accessionYP_003129821 
Protein GI257051988 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATA CCCCCGCCAT CGCAACCGAC TCCCTCCGCA AGGAATACGG CACGGCAGTC 
GCCGTACGGG ATCTGGACCT GACGGTCTCC CACGGCGAGG TGTTCGGCTT CCTCGGCCCG
AACGGCGCTG GCAAGACCTC CACAATCCGG ATGTTGACGA CGCTGCAGGA ACCGACGTCC
GGAACGGCGA CGGTCGCCGG TGAGTCGATC CAGCGCCGCG AGCGGGTCAC ACCACGCATC
GGCTATCTGC CCGAGGAGCC GCCAGTCTAT CCCGAACTCA CTGGCCGGGA GAACCTCCAG
TACGTCGCCG GGCTTCGTGG TGTCGCGGCC GACGATCGCA TCGAGACGCT CCTCGAGCGG
TTTGGGCTCG CTGAGGCGGC TAACCGTGCC GTCGCAGGCT ACTCGAAGGG GATGAAACAG
AAACTCGGCT TGATCGGCGC GATGGTCCAC GAGCCCGAGG TCCTGTTCCT CGATGAGCCG
ACCGCCGGGC TGGACCCTCG GGCGGCCCGG ACCGTCAAGG ACACCATCGC CGATGTCTCC
GAGCGAGGGG TCACGGTGTT CCTCTCGACG CACATCCTGC CCGTCGTCGA GGAGTTGGGT
GATCGAGTCG GCGTCTTGCA GGACGGCCAG CTCGTCGCCG AGGGGCCACC CGAGGACCTG
GGATCCCGGC TCGGTGAAGA CGCCGACCTG GAGGATGTCT TCCTGAACGT GACCCGTTCG
CGTGCCAGTG TCGGGACTGT TGGCGAACAA TGA
 
Protein sequence
MSDTPAIATD SLRKEYGTAV AVRDLDLTVS HGEVFGFLGP NGAGKTSTIR MLTTLQEPTS 
GTATVAGESI QRRERVTPRI GYLPEEPPVY PELTGRENLQ YVAGLRGVAA DDRIETLLER
FGLAEAANRA VAGYSKGMKQ KLGLIGAMVH EPEVLFLDEP TAGLDPRAAR TVKDTIADVS
ERGVTVFLST HILPVVEELG DRVGVLQDGQ LVAEGPPEDL GSRLGEDADL EDVFLNVTRS
RASVGTVGEQ