| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0894 |
|---|
| Symbol | secE |
|---|
| ID | 8383167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 863070 |
|---|
| End bp | 863243 |
|---|
| Gene Length | 174 bp |
|---|
| Protein Length | 57 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 644971958 |
|---|
| Product | preprotein translocase subunit SecE |
|---|
| Protein accession | YP_003129810 |
|---|
| Protein GI | 257051977 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG2443] Preprotein translocase subunit Sss1 |
|---|
| TIGRFAM ID | [TIGR00327] protein translocase SEC61 complex gamma subunit, archaeal and eukaryotic |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00661299 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTTC CGTACGATAT CACGTCATAC GTGCGGGTAC TCAAGCTCGC GAGTACCCCC
TCCTGGCAGG AGTTCTCTCA GATCGCGAAG ATCGCGGGCG CGGGCATCCT TTTGGTTGGA
TTGCTCGGGT TCCTCATCTT CGTCATCATG ATCCCGATCA CGGGTGGTCT GTGA
|
|---|
| Protein sequence | MDVPYDITSY VRVLKLASTP SWQEFSQIAK IAGAGILLVG LLGFLIFVIM IPITGGL
|
|---|
| |