Gene Huta_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0883 
Symbol 
ID8383156 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp849977 
End bp851305 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content62% 
IMG OID644971947 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003129799 
Protein GI257051966 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0722286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTGAAC TCGACACCGC TGGCGATACA CAGAACTCTC GACAGCCCGC AACCAAGCGA 
GAAGGCAGCC GGTACTACTC TCGCCGTCAG GCCCTCGTCT CGCTTACGTC GGTTGGGACG
CTCGCACTGG CCGGGTGCAA CTTCCAGTCG GTGATGCCAG GTGTGAAACC ACTCTGGGAA
CGGGATTTCT CGTCTGCGAT GGCCGCGGGC CCACCAGCCG CGACTGATGA ACACGTTGTC
GTCGGTGGAC AGGATACGCA ACTGCACGCG TTCAGTGCTG ACGGGGAGCG AACCTTTCGC
TTCGAAACCG GTGGCCCGAT CGAGGCACGA CCGGCTGTCC CTGCATCGGG TGGACCGGTA
CATGTCCACA GCACTGACGG TGACCTCTAC ACGGTCGGAC TGTCGGGGGC GAAGCTATGG
CATGTGGAGG GCCAGGCACA GAACAGATGG CTCGATCGTC AGGGCCCGTT GCTGTTCGGC
ACCGCTCCGG ACGGCCGTGG AGTCACCGGC TACGATGCGC GTGATGGTAC ACGTCGCTTC
CAGCTGTCGG GCCAAGCCGA TCCGTACCCT CCCTCTCCGT TCAGTAGGTC CCCCACGCTC
AGTGGGTCGG TGTGCCTCCT TTCGGCTCCG AACTCGGATG GAGACGAGAA GCTGGTGGCG
CACGCTCCGA GGACTGGTGA AGTGCTGTGG GAGTCGAAAG CTCGCGATCG GTCTCCCTCC
GTCGTAGCTG CGGATGAGTG GGTCCTCACG GCGTATTGGC GGAGTGACTC ATATTCTACC
GTGTGCATGC GCCGGGCCAG CAATGGCCAT ATCCGATGGC AGACTGCGGT TGCTGGCGAC
GTCTCCAGTC ATTTTGGATC GCCACTCTGG CTTGGCGAGC ACGTCTATGT GCAAAGTAGC
CGTGACGAAC GTCCGGATGA ACTCGTCGCC ATCGACCGTG CGGATGGATC CATTCAGTGG
CGTCGAAGCG TCGGATACGA ACTCGAGAGG GTGACGCCGA CTTCTGCGGG CGTCTTCGTT
GCGAGCTCGG TCGTTGACCC CGACGGCGGT ATCTTGGTTC GGCTGGACGC TTTTTCCCTC
GATGGCACCC GGCGATGGCA GACGACGACT GACGTCCACA TCGGCGGGAC AGTTCAATCG
TTGGGGCGTG TCGGTGGGGT TCTCTTTGTT GCCAGCGACA ACGAAATCGC TGCCTATGAC
CCTGACAGCG GTTCGCGTCG GTGGCAATAC AACCCGGAAT CCTCGCAGAT TGGCGTGTCG
GCGGCTGATG GCGCGCTGTA CATTTCACAC AGAGACACCG GGGGCCTGGC GCGATTGCCA
ACGGATTGA
 
Protein sequence
MRELDTAGDT QNSRQPATKR EGSRYYSRRQ ALVSLTSVGT LALAGCNFQS VMPGVKPLWE 
RDFSSAMAAG PPAATDEHVV VGGQDTQLHA FSADGERTFR FETGGPIEAR PAVPASGGPV
HVHSTDGDLY TVGLSGAKLW HVEGQAQNRW LDRQGPLLFG TAPDGRGVTG YDARDGTRRF
QLSGQADPYP PSPFSRSPTL SGSVCLLSAP NSDGDEKLVA HAPRTGEVLW ESKARDRSPS
VVAADEWVLT AYWRSDSYST VCMRRASNGH IRWQTAVAGD VSSHFGSPLW LGEHVYVQSS
RDERPDELVA IDRADGSIQW RRSVGYELER VTPTSAGVFV ASSVVDPDGG ILVRLDAFSL
DGTRRWQTTT DVHIGGTVQS LGRVGGVLFV ASDNEIAAYD PDSGSRRWQY NPESSQIGVS
AADGALYISH RDTGGLARLP TD