Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0881 |
Symbol | |
ID | 8383154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 847969 |
End bp | 849336 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644971945 |
Product | geranylgeranyl reductase |
Protein accession | YP_003129797 |
Protein GI | 257051964 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.170951 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACCG CCGAGTACGA CGCTGTCGTC GTGGGAGCCG GCGTTTCCGG TTGCTACGCG GCGGCGACCA TGGCCGAGGA GGGCCTCGAC GTGGTGATCG TCGAGCGCAA GTCCGAATCG GAGGCCGGCC ACATCGCGTG CGGGGATGCA CTCAAAGGCG CAAGCAACTT CCCCGAGGCG ATCCCACGCT CGCAGATCGA ACCGTCGATC ACCAACTCGG TCGTCGACCA CGGCCACTTC GAACTACCGA GTGAGGGCAC CGCCGTCGAC ATCCCCGTCC CGGGCGAACT CGCCGTCATC GACCGCCTTG AGTTCGGCAA GTTACTCATC GAAGGGGCAG CAGACGCGGG CGTAACGTTT CACTACGACA CTGTCGTCAA TACGGTGCTC CAGGACGGCG CTCGCGTCAC CGGCATCGAG GCGATCCGCA AGGGTGAGCC AGTCACCTAC GAAGCCCCAG TTGTGATCGA CGCCGCCGGC GCGCTGTCGA TCCTCCAGGA CGAGGCCGAT CTCGCCGACG CGACCTTTGA TACGAACGTC ACCTACTCGC AGTTCTCTTC GGGCTACCGG GAGATCATCG AGGTCGAGGA ACCCGTCGAG TGGCACGACG CGCTGGTGCT CAAACCGACC GAGCGCTCGG CCGGCTATCT GTGGTACTTC CCGCGGACGG AGACAGAGAT CAACGTCGGG CTGGGCTTTC AGATGGGCGA GGAACCGATG GAACTCGTCG ACGCCCTGCG GCGGGACATC GAGAACCGCG CGGAGTTCAA AAACGCGACT GTTAAGGACA AACTCGGCGC GTCGATCCCG ACTCGGCGGC CCTACGATTC CGCCGTTGCC CCCGGATTCA TGGCAATCGG GGACGCCGCA GCCCACGTCA ACCCGACCAC CGGCGGCGGG ATCGCCGGCG CGGCCTACGC CGGGAAGTAC GCCGCCGACC AAGCTATCGA GGCCGTCGAG GACGGCGATC CCTCCGAGGC AACGCTGTGG CGGTACAACG AGCGCGTCAT GGAGCACTTC GGCGCACGCT ACGCAGCGCT TGACGTCTAC AACATCTTCA CGACCGCCTA CGAGATCGAC GACCTGACGG GCATGCTGGC CAGCCTCCCG ATGACGAAAC TCTCCGAGGC GCTGTACTCG GGCTCGGCCG ACCTGAGCTG GTCGCTGAAA CTCAAGACGG CACTGAAGAG TCGGGGCCAC TGGGGGACGA TTCTCGACCT CTATCGCACC AAACGCCACG CCGACGAACT CCTCGAGCAC TACGAGGCAT ATCCGGAGTC ACCGAGTGGC TTCGAGGCCT GGCAGGATCG GCGTGACGAC CTCATCCAGG ACGTCTACGA GACGACCGGG GCCGAGGCGA AGTACTGA
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Protein sequence | MTTAEYDAVV VGAGVSGCYA AATMAEEGLD VVIVERKSES EAGHIACGDA LKGASNFPEA IPRSQIEPSI TNSVVDHGHF ELPSEGTAVD IPVPGELAVI DRLEFGKLLI EGAADAGVTF HYDTVVNTVL QDGARVTGIE AIRKGEPVTY EAPVVIDAAG ALSILQDEAD LADATFDTNV TYSQFSSGYR EIIEVEEPVE WHDALVLKPT ERSAGYLWYF PRTETEINVG LGFQMGEEPM ELVDALRRDI ENRAEFKNAT VKDKLGASIP TRRPYDSAVA PGFMAIGDAA AHVNPTTGGG IAGAAYAGKY AADQAIEAVE DGDPSEATLW RYNERVMEHF GARYAALDVY NIFTTAYEID DLTGMLASLP MTKLSEALYS GSADLSWSLK LKTALKSRGH WGTILDLYRT KRHADELLEH YEAYPESPSG FEAWQDRRDD LIQDVYETTG AEAKY
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