Gene Huta_0860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0860 
Symbol 
ID8383133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp826548 
End bp827480 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content65% 
IMG OID644971924 
ProductTransketolase domain protein 
Protein accessionYP_003129776 
Protein GI257051943 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3958] Transketolase, C-terminal subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.476833 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGA AGATTTCGAC CCGGAACGGC TTCGGGAACG GACTGCTTCG CGAGGCTGAG 
GAACGTGAGG ACTTCATCGT CATGGACGCC GACCTGGCGA AATCCACCCG CGGGGGCTGG
TTCCGTGACG AACTCCCCGA GCGCTGGATC AACGTCGGTA TCTCCGAGCA GGATCTGTTC
GCGACGGCGG CCGGCATCGC CGAAACCGGT CGCCCTGTCT TTGCCAACAC CTTCGCCATC
TTCTCCGAGC GTGGCTTCGA GCAGGTGCGT CAGCAGATCG CCCGCCCGAA GCGCAACGTG
ACCGTCGTCG GCAGCCACGC CGGCGTCATC ACGGGCGAGG ACGGCCCCAG CGCCCAGACC
ATCGAGGACA TCTCGGCGTA CCGTGGGCTG CCGAACATGC GCGTCATCTC GCCGGCCGAC
GCCGTCGAGG CCAACGCGCT CGTGACTGCC CTCGCCGAGG ACGACGATCC CGCCTACCTC
CGACTCATCC GTGAATCCGT CCCCGTCATC CACGACGAGG ACGATTACGA GCCGGAAATT
GGCAAGGGCG AGGTCCTTCG CGATGGCTCG GATGTGACGC TGATCGCTCA CGGTGCGATG
GTCCACGTCG TCCAGGAAGC CGCCGAAGTC CTGGCCGAGG CGGGCGTCGA CGCTCGTGTG
ATCAACATGT CGACGATCAA ACCCATCGAC GAGGAACTCA TCGTCGAGTC CGCCGAGCAG
ACCGGTGCTG TCCTCACCGC AGAGGACCAC AACGTCATCG GCGGGCTGGG CAGCGCGGTC
GCCGAAGTGC TGGCCGAGAA CCAGCCGACC CCGATGAAGC GCGTCGGCAT CGAAGACGAG
TTCGGGACCT CCGGCAACGG GCTGGATCTC TACGACTACT ACGGATTTAC CGGCGAAGAC
ATCGCCGAAG CAGCGAAAGA CCTACTGGCG TAA
 
Protein sequence
MSEKISTRNG FGNGLLREAE EREDFIVMDA DLAKSTRGGW FRDELPERWI NVGISEQDLF 
ATAAGIAETG RPVFANTFAI FSERGFEQVR QQIARPKRNV TVVGSHAGVI TGEDGPSAQT
IEDISAYRGL PNMRVISPAD AVEANALVTA LAEDDDPAYL RLIRESVPVI HDEDDYEPEI
GKGEVLRDGS DVTLIAHGAM VHVVQEAAEV LAEAGVDARV INMSTIKPID EELIVESAEQ
TGAVLTAEDH NVIGGLGSAV AEVLAENQPT PMKRVGIEDE FGTSGNGLDL YDYYGFTGED
IAEAAKDLLA