Gene Huta_0852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0852 
Symbol 
ID8383125 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp819508 
End bp820461 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content67% 
IMG OID644971916 
Productprotein of unknown function DUF81 
Protein accessionYP_003129768 
Protein GI257051935 
COG category[R] General function prediction only 
COG ID[COG0730] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.799612 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTGC CAGTTCAGGG GAACCGGTTC GTCGCATTCG GCACGGTGGC CTCGCTGAGC 
ATGGTCGCGA TCACGGGCCA GCTCCCGTCA ATCGCGGCGT TCCCGACCGA GCAGTTCCTC
GCCCACTGGT GGGTCTTTCC GGCGTCGATC GTCTTCTCGA CGGTCGCGCT GGCCGCCGGG
GTTTCCGGGG CCCTGTTCTT TAGCCCCTTC TTCATGCTCG GCGTCGGGCT GACCCCCGCC
CAGGCGATCG GGGCCGGCCT CCTGACGGAG GTATTCGGGA TGGGCAACGG CCTCCGATCC
TACGTCAAGC AGGGCGTCGT GGACTACGAC ACTGCGAAGT GGCTACTGGC CGGCGCGGTC
CCGGCGACCG TCGTCGGCGC ACTGCTCGCT CACGCCGTCG ATCCGACGCT GTTGAAACTG
CTGTTCGGTG CCGGACTGAT CGCGCTCGGT GCCTTCCTCG TCTACTACGA TCCACCGGAG
GACTGCGAAC CCGGGGAAGG CGAGGGAAAG TTCCTCGAAG CACAAAACAC GGGCCGCGGC
ACGACGACGA TCGAAGCGGC CGACGGCGAG ACGTTCACCT ACGAGACGTG CTGGCGAGCG
CCCGGATTGA CACTCTCGAC CGTCGGTGGG TTCATTACCG GCCTCATCAG CGCTGGCCTG
CCCGAAATCG TCACGACCCA GCTCATCGTC CGGTGTCGCC TCCCGCCGCG AGTCGCAGTC
GCGACGAGTG TCTTCACGCT CGGGATCGCC GCTGGCGCAG GCGCGCTCGT CCACGCGCTG
TCGGCCTCGC CGGTCTGGTA CGTCGTCGCC TGGTCGATCC CGGGCGTACT CGTCGGCGGA
ACGATCGGGT CTCGGGTCGG CAAGTACGTT CCGGGCGACC TGATGGAAGT CGGTCTCGGA
ATCGTCTTCG GGCTCGTGGG CGCGTTGGTG CTCGGCGTCG AGCTGTTGGC GTGA
 
Protein sequence
MDVPVQGNRF VAFGTVASLS MVAITGQLPS IAAFPTEQFL AHWWVFPASI VFSTVALAAG 
VSGALFFSPF FMLGVGLTPA QAIGAGLLTE VFGMGNGLRS YVKQGVVDYD TAKWLLAGAV
PATVVGALLA HAVDPTLLKL LFGAGLIALG AFLVYYDPPE DCEPGEGEGK FLEAQNTGRG
TTTIEAADGE TFTYETCWRA PGLTLSTVGG FITGLISAGL PEIVTTQLIV RCRLPPRVAV
ATSVFTLGIA AGAGALVHAL SASPVWYVVA WSIPGVLVGG TIGSRVGKYV PGDLMEVGLG
IVFGLVGALV LGVELLA