Gene Huta_0788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0788 
Symbol 
ID8383060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp770097 
End bp771200 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content66% 
IMG OID644971853 
Productaminotransferase class V 
Protein accessionYP_003129706 
Protein GI257051873 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCTCG ACGCGCTACG CCACGACATC CCCGTCCTCA CCGATACCGC GTACCTGAAC 
ACCGGTGCGA GCAGCCCTGC CCCGCGGTCG GTCGTCGAAG CGACGACGGA CTGGATCGAG
TATCACAATT TCGAGGCCCC GATCGACGAG GGAATCTACC CACACGCCTG GGACAGCTAC
GAGGCGGCCC GCGAAACCAT CGCTCCCTTC CTTGGCGTTT CGCCGGAGAC GATCGCCCTC
ACGTCAAGCA CGGTCCACGG CATCAACCTG ATCGTCTCGT CGATCGACTG GCAACCCGGC
GACGTGGTCG TCAGAACCGA TCTGGAGCAT CCCGCCGGCG TCCTCCCGTT CGATCGCATG
GCCGATCTCC ACGGGATCGA AGTCCGGACG CTCGAAACCA CCGACGGGCG AATCGACCGC
GACGAACTCC GGACTGCCGT CGACGACGCC CGCCTGCTCG CGATGAGTTC TCTCACCTGG
AGTCACGGCA CCCGGTTGCC GGTCGAGGAG ACAGTCGATA TCGCCCACGA CGCTGGGGCG
CGAGTATTGA TCGACGCCGT CCAGTCGCCG GGCCAGCGGC CCGTCGACTT CGAGGCCTGG
GACGCGGACT TCGTCGCCGG GTCGGGTCAC AAGTGGCTGC TCGGCCCCTG GGGGGCTGGC
TTTCTCTATG TCGCGCCCGA GGCGATCGAC GCACTTGCGC CGCGGCAGAT CGGCTACCGG
AGTGTCGAGG AGTCCGGGGC TACGTCCTAC GAGTACAAGA CCGGCGCACC GCGATTCGAA
CTCGGGACGG CCTCGCCAGC CCCGCACGTC GGCCTCGCCG CGGCGATCGA CCTGCTGGAA
TCGATCGGGA TGGAAACTGT TCAGACACGG ATCGAACGAC TGACAGACCG GCTGAAGGCG
GGACTCGGCG AGCGGCTCAT CAGCCCCCGG GAGTACGAAT CGGGCCTGGT CACGTTCGAC
GCTGGGGATC CCGAAGCCAC GGTCGAGCGG CTGGCGGACG CCGGTGTCAT CGTTCGATCA
CTGCCGTATC CTGAGGCTGT GCGGGCCTCG GTTCACGGGT TCAATACGGC CGAGGATGTC
GATCGGTTGC TCGAAGCACT CTGA
 
Protein sequence
MDLDALRHDI PVLTDTAYLN TGASSPAPRS VVEATTDWIE YHNFEAPIDE GIYPHAWDSY 
EAARETIAPF LGVSPETIAL TSSTVHGINL IVSSIDWQPG DVVVRTDLEH PAGVLPFDRM
ADLHGIEVRT LETTDGRIDR DELRTAVDDA RLLAMSSLTW SHGTRLPVEE TVDIAHDAGA
RVLIDAVQSP GQRPVDFEAW DADFVAGSGH KWLLGPWGAG FLYVAPEAID ALAPRQIGYR
SVEESGATSY EYKTGAPRFE LGTASPAPHV GLAAAIDLLE SIGMETVQTR IERLTDRLKA
GLGERLISPR EYESGLVTFD AGDPEATVER LADAGVIVRS LPYPEAVRAS VHGFNTAEDV
DRLLEAL