Gene Huta_0745 details

Gene Information

• Locus tag: Huta_0745
• ID: 8383015
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 730097
• End bp: 730762
• Gene Length: 666 bp
• Protein Length: 221 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644971808
• Product: Bacterio-opsin activator HTH domain protein
• Protein accession: YP_003129663
• Protein GI: 257051830
• COG category: [R] General function prediction only
• COG ID: [COG3413] Predicted DNA binding protein

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGATACC TCCGTGCCAG GCTGGACCTG CCGGCGGAGT TGCACCATCC GATGCAGGAG 
TTCCTCCGGG AGAGCGACCG CATGGAGCGC GAGGAGTTGC TGACCTGGAA CGTCCTGCCC 
GGCCGCGACG TCGAGTACGC GCTGTTCTAC GCGGTCGGCG ACCGGGCAGC CTATCGCGAG 
GCGATCGACG ACGTCGACTC GATTCCCGAG TACACGCTGA CGCCAATCGA CGATGAAAGC 
TTCTACATCT ACGTCTGCCA GGAGACTCGC GAGGAAGAGC GGGTCTGGCG AACGGTCTTC 
GCCGACCTGA ACCTCGTTGT CATGCCGCCG ATCGTCTACG ACAGCCGCGC CCGAACCCAC 
ATCACGGTCG TCGGCACCGA CGACTCGCTG AGCACCCTCG TCGAGCAGCT GGAGGCGGGT 
CCGGGCGTCG ACGTCGAGGT GCTGGAGTTG GGTGACTTCG ACCGCAGACA CGGGGCGATC 
GCCGGCCAGT TGACCGGTCG TCAGCTCGAA CTCGTCGAGA CCGCCGCCGA ACTCGGATAC 
TACGAAGTGC CCCGAGGGGC GTCGCTGGAG GCGGTCGCCG ACGCGGCGGG CGTCGCGCGC 
AGCACGGCCT CGACGGTTCT CCGACGGGCG GAATCGGCGG TGATGGGGGC GCTGGTCGGG 
GCCTAA 

 

Protein sequence

MRYLRARLDL PAELHHPMQE FLRESDRMER EELLTWNVLP GRDVEYALFY AVGDRAAYRE 
AIDDVDSIPE YTLTPIDDES FYIYVCQETR EEERVWRTVF ADLNLVVMPP IVYDSRARTH 
ITVVGTDDSL STLVEQLEAG PGVDVEVLEL GDFDRRHGAI AGQLTGRQLE LVETAAELGY 
YEVPRGASLE AVADAAGVAR STASTVLRRA ESAVMGALVG A