| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0704 |
|---|
| Symbol | |
|---|
| ID | 8382973 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 693412 |
|---|
| End bp | 695091 |
|---|
| Gene Length | 1680 bp |
|---|
| Protein Length | 559 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 644971767 |
|---|
| Product | NADH-ubiquinone oxidoreductase chain 49kDa |
|---|
| Protein accession | YP_003129623 |
|---|
| Protein GI | 257051790 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTTAC AGGAACGCTC GCCGGCCGAA CCGGACGTCG GCGTGACCGA GGACGGACTG
GACTACGACG AACTCGCCGA TCTCCTCGGC GACCACGTCC TCGATCGCGA GGAACACGTC
AACGCCGAAG GGTTCGTGAT CCGGCCCGAC GAGGTCGAAG ACGTCCTTTC GACGCTGAAG
GAACGGGCCG GCTTCGATCA CCTCTCGGCC GTCACCGCCC AGGAGTACGA CGACCGCTAC
GAGTCGATCT ATCACCTCAA GAAGTACGAC GACCCGACCC AGGAACTCAG CGTCGTCGTT
CCGACGAGTT CAGAGGAGCC GGTGAGTCAG TCGGGCGCGT CGGTGTTCGA CACTGCCGAC
TGGCACGAGC GGGAGGCCTA CGACCTCGTG GGCATCGAGT ACGACGAGCA CCCGGATCTC
CGCCGGATTC TCCTCCCCGA AACCTGGCAG GGCCATCCGC TCTCGAATGA GTACAACCAG
ACCCAACCAC AGGTCGTCAC CCTTCGAGAG CACGCCAATC CCCTGCAGGA GGACAAACAG
AGCCCCCAGG ATCCCGATAC GATGTTCGTC AATATCGGGC CACACCACCC GGCGACTCAC
GGTGTCCTCC ACGTCAAGAC GGTGCTGGAC GGCGAGCAGA TCGTCGATCT CGACCCCGAT
ATCGGGTATC TCCACCGGAG CGAGGAGCAA ATGTGCCAGC AGGGCACCTA CCGCCACCAG
ATCATGCCCT ATCCCGACCG GTGGGACTAC ACGCCCGGTG GCTTGCTCAA CGAGTGGGCC
TACGCCCGCG CAGCCGAGGA CTTGGCCGAC ATCGACGTCC CGGAGTACGC CCAGGTCCTC
CGGACGATGA GTGCCGAGCT GACCCGGATC GCGGCCCACA TGCTCGCGGT CGGGACCTTC
GGGCTGGACC TCTACGGGGA CTTCACGGTC ATCTTCATGT ACGCCGTGCG GGACCGGGAA
GTCGTCCAGA ACCTGCTCGA GGACCTCACT GGCCAGCGGC TCATGTTCAA TTACTTCCGG
CTTGGCGGCG TCGCCTGGGA TCTGCCCGAA CCCCGCCAGG AGTATCTTGA GAAGGTTCGG
GAATTCACCG ATGAGCTCCC CGAGCGACTT GAGGAGTACC ACGACCTCAT CACGGGCAAC
GAGATCTTCC AGATGCGGTG TATCGACACG GGCGTCCTCC CGCCGGAGGT CGCCAAGTCC
TACGGCGCGA CCGGGCCCGT TGCTCGCGGC TCGGGCGTCG ATTACGACCT TCGTCGTGAC
GATCCCTACG GCTACTACGA CGAACTCGAC TGGGACGTCG TGACCGAGGA CGGGATGGAC
AACTACGCCC GGGTTCTGGT CCGGCTTCAG GAGGTCGAGG AGTCCGCGAA GATCATCCGA
CAGTGTCTCG ACCTGCTCGA GGACTGGCCC GAAGACGATC GCACTATCCA GTCGAACGTC
CCGCGGACCC TCCGACCGGA TCCGGACAAG GAGGTTTACC GCGCGGTCGA GGGTGCGAAG
GGTGAACTCG GCATCTACAT CCGTAGCGAC GGCACGGACA AGCCGGCGCG GTTCAAGATC
CGGAGTCCGT GTTTCTCGAA TCTCCAGACG CTGCCGGTGA TGTCCGAGGG CGAGTACATC
CCTGACATGG TGGCGTCGCT CGGCAGCCTC GACATCGTGC TCGGGGAGGT GGATCGGTGA
|
|---|
| Protein sequence | MSLQERSPAE PDVGVTEDGL DYDELADLLG DHVLDREEHV NAEGFVIRPD EVEDVLSTLK
ERAGFDHLSA VTAQEYDDRY ESIYHLKKYD DPTQELSVVV PTSSEEPVSQ SGASVFDTAD
WHEREAYDLV GIEYDEHPDL RRILLPETWQ GHPLSNEYNQ TQPQVVTLRE HANPLQEDKQ
SPQDPDTMFV NIGPHHPATH GVLHVKTVLD GEQIVDLDPD IGYLHRSEEQ MCQQGTYRHQ
IMPYPDRWDY TPGGLLNEWA YARAAEDLAD IDVPEYAQVL RTMSAELTRI AAHMLAVGTF
GLDLYGDFTV IFMYAVRDRE VVQNLLEDLT GQRLMFNYFR LGGVAWDLPE PRQEYLEKVR
EFTDELPERL EEYHDLITGN EIFQMRCIDT GVLPPEVAKS YGATGPVARG SGVDYDLRRD
DPYGYYDELD WDVVTEDGMD NYARVLVRLQ EVEESAKIIR QCLDLLEDWP EDDRTIQSNV
PRTLRPDPDK EVYRAVEGAK GELGIYIRSD GTDKPARFKI RSPCFSNLQT LPVMSEGEYI
PDMVASLGSL DIVLGEVDR
|
|---|
| |