Gene Huta_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0613 
Symbol 
ID8382881 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp616093 
End bp617001 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content68% 
IMG OID644971676 
ProductAuxin Efflux Carrier 
Protein accessionYP_003129533 
Protein GI257051700 
COG category[R] General function prediction only 
COG ID[COG0679] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTGT TGACGCGGCT GGCCGTGATG ATCGGTTTGC TCACCGTGGG GGTCGGGCTC 
CGGCGGGTCG GCGTCCTCGA CGCGACGCGG GTCGAGTGGC TCAACAGTGT CGCCTTCTAC
GTGGTGTTGC CGGCACTCGT GTTCAACTCG ACGTACGACA AACCGCTGTC TGAGATCGTC
ACGCCGACGC TGCTGGTTGG GCTGGTCGGC GTCCTGGGAA TAACCGCCGG CGTCGGGTGG
CTCGTCCACC GCCGGATCGA CGACGACGGG GCGCGGGCCG CCGCGACGGT CCAGTCATAT
CACACGAACC TGGGCTATAT CGGCCTCCCG GTGGTCGCGA GTGCGCTCGG TGAACGCGCG
GCCGGGATCG GCAGCGTCAT CCTCGGGATG GGCGCGCTCG TCCAGATCCC GCTGACCGTC
TCGATCCTGG TCGCGGTGAC TGGCAACAGC CGGAATTTCC GTAGCGAAGT CCGGAGACTG
GCCACCAACC CCGTCCTCGT CGCGCTCGTC ATCGGGCTTG CGGTCTCGCG CTCGCCGGCG
ACGGTGACCG GCATCCCGGC CGACGTGATC GCGCTGGTCG CCGAGGCGGC GCTGCCGGTC
GCGTTGCTCT GTGTCGGGGG CTCCATCCAG CTCCAGTCCA TGGAAGCCGA TCGCTCGATC
GTCGGGCCAG TACTCGCGAT GAAACTCCTC GTGATGCCGG TGGTCGCCTG GGTGGTCTAC
GCCGCCCTGG GTGCCGACCT CTGGACGCTC CGGACCGCTG TCGTGATGTT CGGCGCTCCC
GCGGCCGTCT CGACGTTCGT CTACGTCACC GAGATGGGTG GCGACCGTCG GCTGGCGTCG
ATCCTCGTCT TTCTCTCGAC TGTCGCCTCG GCGTTTACAC TGTCGGCCTG GATCGCCATC
GTGCCGTGA
 
Protein sequence
MDVLTRLAVM IGLLTVGVGL RRVGVLDATR VEWLNSVAFY VVLPALVFNS TYDKPLSEIV 
TPTLLVGLVG VLGITAGVGW LVHRRIDDDG ARAAATVQSY HTNLGYIGLP VVASALGERA
AGIGSVILGM GALVQIPLTV SILVAVTGNS RNFRSEVRRL ATNPVLVALV IGLAVSRSPA
TVTGIPADVI ALVAEAALPV ALLCVGGSIQ LQSMEADRSI VGPVLAMKLL VMPVVAWVVY
AALGADLWTL RTAVVMFGAP AAVSTFVYVT EMGGDRRLAS ILVFLSTVAS AFTLSAWIAI
VP