Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0606 |
Symbol | |
ID | 8382874 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 607082 |
End bp | 607534 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644971669 |
Product | protein of unknown function DUF296 |
Protein accession | YP_003129526 |
Protein GI | 257051693 |
COG category | [R] General function prediction only |
COG ID | [COG1661] Predicted DNA-binding protein with PD1-like DNA-binding motif |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.204096 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCACCT TCGAAGGCGA CACCGGCGAA GTGGTCCTAC AGCTCGAACC GGGCGACAAA GCCTTAGAAT CGATCGAGGC GGCGATCGAC GAGCACGGCA TCGACACCGG GTACGTCGCC TCCGGGATCG GCTCGCTGAC GCAGTTGCAC ATCCACTACG TCTCGGGATA CGACTCCTTC CCCGACTTCC CCGACGAGGA CGAGGAGATC GACGAGTACG TCAAGGAGGA GGCGGCCTGG GAGGTCGGCT CGCTCCAGGG CGCGATCGCC GACGGCGAAC CCCACCTCCA CATCACGGCG TTCGACGCCG AGCGTGAGAA GATGCTGGCG GGCCACCTCG AACCCGACTC GATCGTCCAC GCGCTGATGG AAATCGTCAT CCAGCCGATC GAGGGCGTGG AGCTGACCCG TCGCCCCGAG CAGATGGACA TCCCGATGCT CCAAGAGCGG TAA
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Protein sequence | MRTFEGDTGE VVLQLEPGDK ALESIEAAID EHGIDTGYVA SGIGSLTQLH IHYVSGYDSF PDFPDEDEEI DEYVKEEAAW EVGSLQGAIA DGEPHLHITA FDAEREKMLA GHLEPDSIVH ALMEIVIQPI EGVELTRRPE QMDIPMLQER
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