Gene Huta_0570 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0570 
Symbol 
ID8382837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp575216 
End bp575845 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID644971632 
Producthalocyanin domain protein 
Protein accessionYP_003129490 
Protein GI257051657 
COG category[C] Energy production and conversion 
COG ID[COG3794] Plastocyanin 
TIGRFAM ID[TIGR03102] halocyanin domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.23024 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG ATAGTGTCGA ATTCTCGCGT CGGGCGCTCC TTCGTGCCAG TGGCGCGGCT 
GCTGGCGGCA CGGCAGCCAT TGGTGGCGTC GGCTCCGCCG CGGCCCAGGA AGGTGGCAGC 
GGCCAGATCG ATTACAGCGG GTGGTTCTCG GGCGTGAGCA ACTTTTCATC GACAGTCGAC 
CGCCGTGGCG AAGACGAAGT CACGGTCGAA GTTGGTGTCG AGGCCAATCA AGGGTACTTC 
GGGTTCGGGC CGGCGGCGGT GTGGGTCGAC CCCGATACGA CCGTCACCTG GGAGTGGACG 
GGCCGTGGCA ACGCTCACAA CGTCGTGGCT GAGGACGACT CGTTCACATC GGGGTCGGCC 
GTCGCGGAGG CCGGCACGAC CTACGAACGG ACGTTTTCGG AAGCCAGGAT CCACAAATAC 
TACTGTGAAC CCCACGAGTT GAACGGCATG AAGGGTGCGA TCGTCGTCGG CGATGACGTG 
CCGACGGTCG AAGTCGAAGG TCCGAGCGGC CCAGTCGTCC CCGAGAGTGC GAAGCTGTTC 
GGCGTGACGT CCGGGTTCGC GATGACTGCC GTGTTGGGAC TGGCGTATTT CTTCATGAAG 
TACGGTGGTG ACTACGGCGA CGTCGAGTGA
 
Protein sequence
MTDDSVEFSR RALLRASGAA AGGTAAIGGV GSAAAQEGGS GQIDYSGWFS GVSNFSSTVD 
RRGEDEVTVE VGVEANQGYF GFGPAAVWVD PDTTVTWEWT GRGNAHNVVA EDDSFTSGSA 
VAEAGTTYER TFSEARIHKY YCEPHELNGM KGAIVVGDDV PTVEVEGPSG PVVPESAKLF 
GVTSGFAMTA VLGLAYFFMK YGGDYGDVE