Gene Huta_0569 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0569 
Symbol 
ID8382836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp574469 
End bp574864 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content56% 
IMG OID644971631 
ProductProtein of unknown function DUF1628 
Protein accessionYP_003129489 
Protein GI257051656 
COG category[S] Function unknown 
COG ID[COG3430] Uncharacterized protein conserved in archaea 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.199871 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCCAA TAACATACTT CAGAGACGAC GAATCGGGCG TGTCACCAGT CATCGGCGTG 
ATCCTGATGG TCGCCATCAC GGTGATTCTG GCGGCCGTCA TCGCGACGTT CGTCCTCGGG
CTGGGCGAAC AGATCAGCGA TACGGCACCG TCCGCGACGT TCACGTACGA TCACGACGGT
AGTAATACGC TTACGATCAC TCACAGCGGC GGCCAGTCGC TGCAGTCGGC CAATATTGAT
ATAAAAGCCT CAGCTGGGAG TCCGGGAACT TGGACCGCAT CTGAGATATC TGCCGGTGAC
TCAATAGACG TCACTGGGAT ATCCTCGAGT GACACTGTCC AGGTCATCTG GAACTCACCT
GACGGCGATC AGACGGCCAT TCTGAGCGAG TGGTAA
 
Protein sequence
MNPITYFRDD ESGVSPVIGV ILMVAITVIL AAVIATFVLG LGEQISDTAP SATFTYDHDG 
SNTLTITHSG GQSLQSANID IKASAGSPGT WTASEISAGD SIDVTGISSS DTVQVIWNSP
DGDQTAILSE W