Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0560 |
Symbol | |
ID | 8382827 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 565696 |
End bp | 568101 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644971622 |
Product | NADH dehydrogenase (quinone) |
Protein accession | YP_003129480 |
Protein GI | 257051647 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.640167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCAATCAC CGAGTCAGAG CGTCCTCCTC GTCGTGCTGG CGTTGCCGTT TCTGGCCGCA GCGGTCGCGC CGCTGGTCTA TCGCCTGGTT GGCGAGCGCG TCGCCTACTT CGGAGCGGCG GTCGCAGCAC TCGCCTTCGG GCTGATCGGC ACCCAGTACG GGGCTGAGGG GGTCGTCTCG ATACCGTGGA TCCCATCGCT TGACGTTTCG CTCGCACTGT ACGTCGATGG CCTCTCGCTG TTGCTCGGGT TCGTCGTCAG CGGGATCGGT ATCCTGATTT TCACCTATTC GGGCGGATAC ATGCACGACG AACCGGGGAA AGCGAAGTTC TACACGACGT TGCTCGTGTT CATGGGCGCG ATGCTCGGGG TCGCCTTCGC CGCCGACCTC CTCGCGCTGT TCGTCTTCTG GGAACTCACG AGCGTCTCGT CGTTCATCCT GATCGGCCAC TACCAGGACG ATCCAGACTC CCAATACGCC GCCCGGAAGG CAATGATCAT CACGGTCGCC GGCGGGCTGT TCTTGCTCAT CGCCTTCCTC CTGTTGCATA CCGTCTCAGC AGACGTCATG GGGACGGCGA CGTTCCGGCT GGCCGGCGAG GGCTCGATGA TCGAAAACGC CGGGGCGATG CGGGAGAGAC TTCGGTCGGC GGGACTGTTC GTGCCAGTTC TGGCGCTGCT CGCGGTCGGT GCCGCGGCCA AATCCGCGCA GGTGCCGCTG CACATCTGGC TGCCCAACGC CATGGAGGCC CCGACACCGG TCTCGGCCTT TCTCCACTCG GCGACGATGG TCAAAGCCGG CGTGTATCTC ATCGGCCGGT TCCGGCCGCT GCTTGGCTCG ACCGAGTGGG AACTCCTGTT TGCCGGCCTC GGCCTGCTGA CGATGACCGT CGGCGCGATG CTCGCGATCA AAGCCGACGA TATCAAGGAA CTGCTCGCGT ATTCGACGGC CTCGCATCTC GGGCTGATCG TCGCCGGGTT CGGCATACAG TACAAATACG GTGCAGAGAC AGGCGCGTTC CACATCCTGA ATCACGCGCT GTTCAAGGCG GCGCTGTTCC TCGTCGCGGG GATCGTCGCC CACGAGGCCG GCAGTCGGCT GCTGTCGGAA CTCGGCGGCC TCTGGCGTGA CCTCCCGATC ACCGCCGCCG TGGCCGTCGT GGCGGCCCTC GGCATGGCCG GCCTCCCGCC GTTCAACGGT TTCTACTCCA AGGAACTGCT GTTCGAGGCG ACCTTCCACG CCGCCGAGCA CGCAGGTGGG CTGTGGTGGC TACTTCCGGT CGTCGCGGTC TTCGGGAGTA TCTTCACGTT CCTGTATTCG ATCAAGTTCC TCTCGCTGTT CTTCGGCGAC CGGCCGGACG CCCTCGAGCA CGTCCACTCG CCGCCCCTGC CGATGCTCGC GCCGCCGGTC ATCCTCGCCA CGCTGGCGGG TGTGATCGGC CTCGGCGGTA TCGGTGGGAC ACTCGGCATG CACTTTGATC CGCTCGAAGA TTTCGTCGAA CGGGTCATCG TGGCCGCCGG TGTCGAGGAT CCACACTTCG GGTACTATCT TCCCACCTCA CTCACGCCGG CCGCGGGCAT GAGTGCGGTC ACGATCGGAG TCGGCGTGGT CGCCTATCCC TACTACGATC GGCTCGCGGC CGTGGTCGAT CGGCTGGCGT CGATCAAGCC GCTGTCGCCG AACTGGTACT ACGACGGGCT CGTCGGCTGG CTCGATCAAA CGACGGTCGT CACCGAGCGC ATCCATACCG GGCGGATTCG GACGTACGCG AGCTGGCTCA TGCTCGGCGT CGCCGCACTG GCGGTCGGTG GCTACGTCGC TGCCGGGATC GTCCTGCCGG CGCTGTCCTC GATCACGCTG GCTGCCCCGA TCGTCATCGT GCTTGGCGTC GCCGTCGTGG CGGCACTGGC CGTGACGATC GCACCCTCAC ATGTCGCCGG CGTCCTGACG CTGTCGATCC TCGGGTTCAT GGTCGCCATC TTCTACATCC TGGCGAACGC GCCGGATCTG GCGCTGACTC AGCTCGTCAT CGAGACGCTC GTGCTCGTCC TGTTCCTGCT CGTGTTGAAC AAGTTGCCGG CGTTCTACGG CGATCTGAAA CGCCGCCAGA TAGTCACGGA CACCATCATC TCGGGGGTCG TCGGCGTGAC TGTCTTCCTG ACGGTGCTCG TCTCGACGGC CGCAACGCCG GGGAAGCCGA TCTACACGTA CTTCCTCGAA CGCGGTGGGG TCCCCACAGA GCACGGCCAG TGGTTGCTCG AGTGGGGTGG CGGAAGCAAC ATCGTGAACG TCATCCTCGT CGACTTCCGG GCCTTCGATA CGATGGGGGA AATATCCGTC GTCGCCATGG CTGCGCTCTC GATCATTACG ATGATCGCGA TGCGGCAACG AGGTGAGACA CAATGA
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Protein sequence | MQSPSQSVLL VVLALPFLAA AVAPLVYRLV GERVAYFGAA VAALAFGLIG TQYGAEGVVS IPWIPSLDVS LALYVDGLSL LLGFVVSGIG ILIFTYSGGY MHDEPGKAKF YTTLLVFMGA MLGVAFAADL LALFVFWELT SVSSFILIGH YQDDPDSQYA ARKAMIITVA GGLFLLIAFL LLHTVSADVM GTATFRLAGE GSMIENAGAM RERLRSAGLF VPVLALLAVG AAAKSAQVPL HIWLPNAMEA PTPVSAFLHS ATMVKAGVYL IGRFRPLLGS TEWELLFAGL GLLTMTVGAM LAIKADDIKE LLAYSTASHL GLIVAGFGIQ YKYGAETGAF HILNHALFKA ALFLVAGIVA HEAGSRLLSE LGGLWRDLPI TAAVAVVAAL GMAGLPPFNG FYSKELLFEA TFHAAEHAGG LWWLLPVVAV FGSIFTFLYS IKFLSLFFGD RPDALEHVHS PPLPMLAPPV ILATLAGVIG LGGIGGTLGM HFDPLEDFVE RVIVAAGVED PHFGYYLPTS LTPAAGMSAV TIGVGVVAYP YYDRLAAVVD RLASIKPLSP NWYYDGLVGW LDQTTVVTER IHTGRIRTYA SWLMLGVAAL AVGGYVAAGI VLPALSSITL AAPIVIVLGV AVVAALAVTI APSHVAGVLT LSILGFMVAI FYILANAPDL ALTQLVIETL VLVLFLLVLN KLPAFYGDLK RRQIVTDTII SGVVGVTVFL TVLVSTAATP GKPIYTYFLE RGGVPTEHGQ WLLEWGGGSN IVNVILVDFR AFDTMGEISV VAMAALSIIT MIAMRQRGET Q
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