Gene Huta_0552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0552 
Symbol 
ID8382819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp559254 
End bp559889 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content65% 
IMG OID644971614 
ProductAMMECR1 domain protein 
Protein accessionYP_003129472 
Protein GI257051639 
COG category[S] Function unknown 
COG ID[COG2078] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00296] uncharacterized protein, PH0010 family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.680771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACGG GTGAGAAAGA CGGCTGTCTC GACACCGAAG CCGGGAAGCA ACTCCTTGAA 
TACGCCCGAG CGGTCGTGGC GGCTGTCGTC ACAGATGGGT CCCCGCCGCC GGCTCCCGAT 
CTACCAGTCC TCTCAGAGAA ACGGGGGACG TTCGTCACCC TGAAGAGCGA CGGCGAACTG 
CGGGGCTGTA TCGGCCGTCC GCGACCCGAC CAACCGCTGG AAGCGACCCT GAACGCTGCC 
GCGACCGAGG CGGCGACGGC GGACCCACGG TTTCCCCCGG TTTCGCCGGA TGAACTCGAG 
ACGATCACGG TCTCCGTTAG CGTGTTGACA CCGCCGGAAG CGCTTCCGGA CATTGATCCG 
GCGGACATCG TCGTCGGTCG TGACGGCTTG ATCATCGCGA CGGGCCGACA GCGCGGACTC 
CTGCTCCCGC AGGTCGCCGC CGATCGGGAC TGGAGTGCAG AGAAATTCCT CCAGGAGACC 
GCGAGGAAGG CCGGATTGTC ACCTGATGGC TGGCAACGCG AGAACACGAC AGTCAAGCGA 
TTTTCGGCGC AGGTGTTTGC CGAGGAGTCT CCGCACGGGA GCCTTAGAGT GCAGGATTAC 
ACGCAGGCCG CGGTGGACGG GCAGCCGACA GACTGA
 
Protein sequence
MATGEKDGCL DTEAGKQLLE YARAVVAAVV TDGSPPPAPD LPVLSEKRGT FVTLKSDGEL 
RGCIGRPRPD QPLEATLNAA ATEAATADPR FPPVSPDELE TITVSVSVLT PPEALPDIDP 
ADIVVGRDGL IIATGRQRGL LLPQVAADRD WSAEKFLQET ARKAGLSPDG WQRENTTVKR 
FSAQVFAEES PHGSLRVQDY TQAAVDGQPT D