| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0549 |
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| Symbol | |
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| ID | 8382816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 553839 |
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| End bp | 556670 |
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| Gene Length | 2832 bp |
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| Protein Length | 943 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644971611 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_003129469 |
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| Protein GI | 257051636 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0909316 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAGG CGACGCGCGA GGGTGACGCC GTCTTCGCCC ACCTCGGCGA CGCCGTCCGG
TCGGCACTGT CCGACCGCGG CTTTACGACG CCCACCGAGC CACAGCGTCG CGCGATCCCG
CCGATCGCCG ACGGTGAGGA CGCGCTGGTG ATCGCCCCGA CCGGCAGCGG CAAGACCGAG
ACTGCGATGC TCCCGGTCTT CGACGCGATC GAAGGCGATC CACCCGACGG CATCGCCGCG
CTGTACGTCA CGCCGCTGCG GGCACTCAAT CGCGACATGC GGGATCGCCT GGAGTGGTGG
GGTGAGACAC TTGACCTCGA GATCGACGTC CGCCACGGCG ACACGACCCA GTATCGTCGC
CAGCAACAGG CCGAGGATCC GCCGGACGTT CTGGTCACCA CGCCCGAGAC CGTGCAGGCG
ATCCTGACCG GTGAGAAGCT TCGGGAGGGA CTCGCAGACG TCGCCCACGT CGTCGTCGAC
GAGGTCCACG AACTCGCGGC CGCAAAACGC GGCGCGCAGT TGACCGTCGG CCTCGAACGG
CTCCGGGACC TCGCCGGCCC GTTCCAGCGG ATCGGGCTTT CGGCGACCGT CGGCGATCCC
GCGGAAGTCG GGCGGTTTCT CACGGGCGAT CGGGGATGTT CGATCGTCGA GATCGACGCC
GGCAGCGACA TCGAGATCGA CGTCGTCCGC CCTTCGATCG AAGAGCGCGA CGAGAACGTC
GCCGGCGAGA TCGTCACCGA TGCCGAGGTC GCCAGTCACG TCAGGCAGAT CGACGAACTG
ATCGAAACCC ACGAGTCGAC GCTGGTGTTT GTCAACACCC GACAGACGGC CGAAGCGCTG
GGCTCGCGAC TCAAGGAATA CGGCACGGAC GTTGGCATCC ACCACGGGTC GCTGGCCTCG
GACACTCGCG TCGAGGTCGA GGACGCGTTC AAGGCGGGCG ACCTGGACGC GTTGCTGTGT
ACCTCCTCGA TGGAGCTCGG GATCGACGTC GGGCGTGTCG ATCACGTCGT CCAGTACAAC
AGCCCCCGGC AGGTCTCCCG GTTGCTCCAG CGCATCGGGC GGGCGGGCCA TCGCCGGGAT
CGAACGTCCG CAGGGACGAT CGTCACGACG AGCCCCGACG AGACCTTCGA GGCGCTCGCC
ATTGCGCGAA TGGCCCGGGC CGGCGAGGTC GAACCGGCAG CGATCCACCA CGGGAGTCGG
GACACCGTGG CCAATCAGAT CGCGGGCGTC GTCATGGACC TGGGAGAGGT CGACGCCCGC
CGCGCCTACG AGATCGTCAC GCGGGCGTAC CCCTTTGGCG ATATTTCCGA AGCTGTCTTC
CGGGAGATCG TGCGTGAACT CGCCGACAAT CGCGTCATTT GGCTCGAGGA AGACGACGAC
GAGCTCTCGA AACGCCGGGG GACCTGGCAA TACTTCTATC ACAACCTCTC GATGATCCCC
GACGAGGCGA CCTACGACGT CGCCGACGGC ACGAGCGGCC GGCAGGTCGG GACGCTGGAC
GAACGCTTCG TCGTCAACTT CGCCGCGCCG GGGGAGGTGT TCATCCAGGC CGGCGAGATG
TGGCGGATCA CCGAGATCGA CGAGGACGAG GAGACGGTCC ACGTCACGCC GGTCGGCGAC
CCGGCCGGCG AAGTTCCCTC CTGGACCGGC CAGGAGATCC CGGTGCCCTA CGACGTAGCG
CAGGAAGTCG CCGAGCTCCG GGGGGTCGCG GCCGAGCAAC TCCGGGCTGG GGGCGAGCCC
GAAAGCGTCG CCCGGCACCT TGCTGGCAGA TATGATGCCG CCGAGGCGAC GATCCGCTCC
GCGCTCGAAC AGATCGAATA TCACGAGGGA CCGGTGCCCG GCCCGAATCG GATCGTCGTC
GAGTTCGAGG GGCGGGACGT CGTGCTTAAT GCTGCCTTCG GCCACAAGGT CAACGAGACA
CTCGGTCGAC TCCTCTCGGC ACTGCTCGGC CAGCGTACGG GCTCGTCGGT CGGCCTCGAC
GTCGACCCGT ACCGGATTTC CCTGGAGGTG CCACGCAACG TCACCGCCGG CGACGTCGTC
GACGTACTCG AATCGACCGA TCCCGCTCAC GTCGAGGGGT TGATCGAACT CAGTCTGAAG
AACGCCGGCG CGCTGAAGTT CCGACTCGCG CAGGTCGCCA CCAAGTTCGG CGCGCTCAAG
AACTGGCGTG GGCGAGGGAG CAACCGCTTC GGACGGGATC GGCTGCTCGA AGCACTCGAG
GGGACGCCGA TCTACGACGA AGCTCTCCGG GAGTTGATCC ACGAGAAACT CGACATCGAC
CGGGCGAGCG AGTTACTTCG GGAGATCCAG TCGGGCGACA TCGTTGTCGA GACTGTCGGC
GGCCGGACGG CGATCGGTCG CGGCGGCCGC TCGGGCAGCA AGGAACTCCT CGCCCCCGAG
AACGCCGACG CGAGCGTGAT CCAGACGCTG AAAGACCGGA TCCAGGAGGA CCGCGTCATC
CTGTTCTGCG TTCACTGTGA GTCCTACAAA ACCACCAAAC CGGTCAAGCG AGTGCGCGAC
CAGCCGAAAT GCCCGGAGTG TGGCTCGACC CGGATCGCGG CATTGAACCC CTGGGACGAG
GAGACCGTCA CGGCAGTCAA GACCGACGAG AAAGATGACG AGCAGGAACG ACGGACGAAA
CGCGGCTACC AGGCCGCGGA TCTCGTCCAG AGCCACGGCA AACAGGCCAT CATCGCGCTG
GCAGGGCGCG GCGTCGGGCC GACGAACGCG GCCCGCATCA TCAACAAACT CCGGGAGAAC
GAGGACGATT TCTACCGGGA TATCCTCGCC CGGGAACGCG AGTACGCCCG GACGCGGTCG
TTCTGGGAGT GA
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| Protein sequence | MSEATREGDA VFAHLGDAVR SALSDRGFTT PTEPQRRAIP PIADGEDALV IAPTGSGKTE
TAMLPVFDAI EGDPPDGIAA LYVTPLRALN RDMRDRLEWW GETLDLEIDV RHGDTTQYRR
QQQAEDPPDV LVTTPETVQA ILTGEKLREG LADVAHVVVD EVHELAAAKR GAQLTVGLER
LRDLAGPFQR IGLSATVGDP AEVGRFLTGD RGCSIVEIDA GSDIEIDVVR PSIEERDENV
AGEIVTDAEV ASHVRQIDEL IETHESTLVF VNTRQTAEAL GSRLKEYGTD VGIHHGSLAS
DTRVEVEDAF KAGDLDALLC TSSMELGIDV GRVDHVVQYN SPRQVSRLLQ RIGRAGHRRD
RTSAGTIVTT SPDETFEALA IARMARAGEV EPAAIHHGSR DTVANQIAGV VMDLGEVDAR
RAYEIVTRAY PFGDISEAVF REIVRELADN RVIWLEEDDD ELSKRRGTWQ YFYHNLSMIP
DEATYDVADG TSGRQVGTLD ERFVVNFAAP GEVFIQAGEM WRITEIDEDE ETVHVTPVGD
PAGEVPSWTG QEIPVPYDVA QEVAELRGVA AEQLRAGGEP ESVARHLAGR YDAAEATIRS
ALEQIEYHEG PVPGPNRIVV EFEGRDVVLN AAFGHKVNET LGRLLSALLG QRTGSSVGLD
VDPYRISLEV PRNVTAGDVV DVLESTDPAH VEGLIELSLK NAGALKFRLA QVATKFGALK
NWRGRGSNRF GRDRLLEALE GTPIYDEALR ELIHEKLDID RASELLREIQ SGDIVVETVG
GRTAIGRGGR SGSKELLAPE NADASVIQTL KDRIQEDRVI LFCVHCESYK TTKPVKRVRD
QPKCPECGST RIAALNPWDE ETVTAVKTDE KDDEQERRTK RGYQAADLVQ SHGKQAIIAL
AGRGVGPTNA ARIINKLREN EDDFYRDILA REREYARTRS FWE
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