| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0540 |
|---|
| Symbol | |
|---|
| ID | 8382807 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 546190 |
|---|
| End bp | 547122 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644971602 |
|---|
| Product | glycosyl transferase family 2 |
|---|
| Protein accession | YP_003129460 |
|---|
| Protein GI | 257051627 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTCT CCGTCGTCAT CTGTTTGCAC ACGCTCGACC GCTACGACGA CTTCACGGAA
GCGGTCGAGA GCGTCCGTGC CCAGACGTAC GACGACGTCG AACTCGTCCT CGTCAGCGAC
GGTAGCGATG GGGTCTTCGA ACAGTTCCGG ACCGACTTCG GCGAGGACGA CGACGCGACG
CTCGTCAAAC TTGCGGAGAA TCGGGGGTTG CTCGAAGCTC GCAACGCCGG TGCCGAGGCA
GCTTCGGGTG AGGTGGTTGC CTTTCTCGAC GACGATGCGA TCGCCGCGCC CGACTGGATC
GATCGACTTG TCGAGGCCTA CGAGGAGCGT GATTCGCTCG CGGTCGGGGG GAAGATGACG
CCGGAGTGGG TGGCGGGCAA GCCTGACTTT CTGCCGGCGG AGTTCTACTG GCTCGTCGGC
GTAACCCATC GCGGGTTCGG CCCCGGCGGC GATATGGATG CGGCTGGTGA AGTTCGGAAC
ACGTTTGGGT CGAATATCTC CTTTCGGCGG GATGTGTTTC TGGAACTCGA CGGGTTCGAT
ACGAAGATTG GGGGGCGACA GGGCGACGCA AACCTCCAAG GGGGCGAGAC AGAGCTATGT
GCCCGGCTTC GCGAATCGTA CGGCGAGGGC GTCTGGTACG TCCCCGACGC CGAGGTCGAT
CACAAGGTGT TCGCGTATCG GACCGGGCTG TGGTGGTTGC TCGACCGGGC GTTCTGGCAG
GGGTATTCGA AACGGGCGAT GGAAGTGCTG GTCGAGGACG ACGGCGGCGA GGAGGGTGAC
TTCCTGGGAC TGCTCCTTGG ACGATTCGTT CCCGCTCGAG TCAGTCAGCT GATCCGGAGA
CCGTCTGTCC AGAGAGTTAC CCAGCTCCTC ACACTGGCCC TGTTCACCGG CGTCGTCGGG
GCTGGTTACC TCTACGGATA CACGCGATAC TGA
|
|---|
| Protein sequence | MRVSVVICLH TLDRYDDFTE AVESVRAQTY DDVELVLVSD GSDGVFEQFR TDFGEDDDAT
LVKLAENRGL LEARNAGAEA ASGEVVAFLD DDAIAAPDWI DRLVEAYEER DSLAVGGKMT
PEWVAGKPDF LPAEFYWLVG VTHRGFGPGG DMDAAGEVRN TFGSNISFRR DVFLELDGFD
TKIGGRQGDA NLQGGETELC ARLRESYGEG VWYVPDAEVD HKVFAYRTGL WWLLDRAFWQ
GYSKRAMEVL VEDDGGEEGD FLGLLLGRFV PARVSQLIRR PSVQRVTQLL TLALFTGVVG
AGYLYGYTRY
|
|---|
| |