Gene Huta_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0539 
Symbol 
ID8382806 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp545017 
End bp546150 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content63% 
IMG OID644971601 
Productglycosyl transferase group 1 
Protein accessionYP_003129459 
Protein GI257051626 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACA GTGGTGTGTG CGTGGTCACG CATCCATTGA GTGCCGCCGG CGAGAACGCG 
ACGCGGACGT TGCTGGACGT TCTCGCCACA CTCGGGCCGG TGGCACTCGT CACTGCCGAC
CTCCCCGGGG ATTCCTCGAT CCGCGACGAT CGTGAGGTGA TCGAGCTGAC TGAGAAGGGG
GCCGGTGAGA GTGTGCTCGT TGCCGCGGTG CGGTTTCTGC TCAACCAGCT TCGGATGTGT
GCGGCGATCC GTCGTCGTCC GGAAGATGTC GTGCTGTTCT TCGGCGCGAC GTCGTATCTC
ATTCCAATCG CCTTCGCCCG CCTCATCGGG AAGACGGTTC TCGTCGAACC CCGCGGCGAC
GTTCCCTTGA CCCTTCGGTT GAACTGGGAA CAGCGCATGC CCGATCACCT CGCAGGGATC
CTGGCCGGAA GCGTTCGACT GCTCGAGCGG GCGGGATTCG CCATCGCCCA TCGAGTAGTC
ACGTATACCC CCAACATGGC CCGCGAGTTG GGGTTGGATC CCGACTCGCC CCGCGTCTAT
CCGCACGGTG CTCGATACGT CGATACGGCG GCGTTCAAGC CGGAGGTCCC CTTCGAGGAA
CGCGACGATG TCGTCGGGTT TGTGGGTCGT CTCGACGAGG AGAAGGGGAT CCGCGAACTC
GTCAGCGTTG CGAAACAGCT TCCCGGGGAT GTGAGGTTCC GGTTCGTCGG GGATGGCCCG
CTGTACGAGT GGGTCGCGTC CGAACTGGCA GAGGAAATCG AGGACGGCTC CGTCGAATTG
GCCGGCTGGG TCGATCACGG GGACGTCCCC GCCGAGTTGA ACCGGATGAA GCTGCTGGTG
ATGCCTTCCG AACCGACCGA AGGACTACCC ACGACGATTC TCGAAGCGCT CGCCTGTGGA
ACCCCCGTGT ACGCCTCGCC CGTTTCGGGA GTGCCGGACG TCGTCCTCGA GGGCGAAACC
GGATTCCACA TTGATTCGCG AGATCCGGAC GTGCTTCGGA GTGCACTCGA GTCCATCCTG
CTCCGGGAGG ATCTCGTGGA TATCAGCGAC CGTGGACGGG ACCTGATCGT GGAGGAATAT
CGCTTCGAGG CAGCCTGCAA GCGGTATCGA GCGCTTCTGG AGTCGGTCGT GTAG
 
Protein sequence
MSDSGVCVVT HPLSAAGENA TRTLLDVLAT LGPVALVTAD LPGDSSIRDD REVIELTEKG 
AGESVLVAAV RFLLNQLRMC AAIRRRPEDV VLFFGATSYL IPIAFARLIG KTVLVEPRGD
VPLTLRLNWE QRMPDHLAGI LAGSVRLLER AGFAIAHRVV TYTPNMAREL GLDPDSPRVY
PHGARYVDTA AFKPEVPFEE RDDVVGFVGR LDEEKGIREL VSVAKQLPGD VRFRFVGDGP
LYEWVASELA EEIEDGSVEL AGWVDHGDVP AELNRMKLLV MPSEPTEGLP TTILEALACG
TPVYASPVSG VPDVVLEGET GFHIDSRDPD VLRSALESIL LREDLVDISD RGRDLIVEEY
RFEAACKRYR ALLESVV