Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0499 |
Symbol | |
ID | 8382766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 504693 |
End bp | 505298 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 644971561 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003129419 |
Protein GI | 257051586 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.38098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCACCAG GACTATTTCC GGAGGAACCA TCGGAGACAC GTATCGAGAT TCTGAAAGCG ACATATTCAG CGTTGTGCGA GCATGGGTAC GCGGATCTGA CGATCGAACG GATCGGTCAG CACTTCCCGA AGAGTACCTC GCTGGTGTAT CACCACTACG AAGGGAAAGA CGAACTCCTG CTCGATTTTC TCTCCTATCT ACTCGAGGAC GCCGAAGAGA ACCTGGGCAC TGACGCTGCC GCCAACGCCC ACGAGCGACT CCAGATAATA TTCGACCAGG TGTTCACCCA GGAGAAGAGT TCGGAGGAGA TTGCCTTCCA GCAAGCGATG GCCTGGATGC GTGCGCAGGC GACGACCGAC GAAGAGTACC GCCACCACTT CACCCAGCAT GACCGGTTCT TCAGGGATCA ACTCGCCGAT ATCATCCGTG ACGGGATCGA GGAGGGAGAG TTCAAGGAAG TCGACCCCGA ACAGATGGGG ATCGCGCTCC ACACAATTCT GTCAGGCACA ATGGCCCAGC AAGTGACGTC CGACGTCGAT CTGTCGACGC TCCGAGCGGA GGCAGAGGCC TACGTCGAGG CGCGCCTGCT CGCCGAGGGT CGGTAA
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Protein sequence | MPPGLFPEEP SETRIEILKA TYSALCEHGY ADLTIERIGQ HFPKSTSLVY HHYEGKDELL LDFLSYLLED AEENLGTDAA ANAHERLQII FDQVFTQEKS SEEIAFQQAM AWMRAQATTD EEYRHHFTQH DRFFRDQLAD IIRDGIEEGE FKEVDPEQMG IALHTILSGT MAQQVTSDVD LSTLRAEAEA YVEARLLAEG R
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