| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0450 |
|---|
| Symbol | hisD |
|---|
| ID | 8382717 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 443841 |
|---|
| End bp | 445115 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644971512 |
|---|
| Product | histidinol dehydrogenase |
|---|
| Protein accession | YP_003129370 |
|---|
| Protein GI | 257051537 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0141] Histidinol dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00069] histidinol dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.722983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACGTAC AGTCCATTTC CGACCTCGAC GACCGACGGC GACGAGCGCT CTTCGAGCGA
GATTCCGGGA TCGGCGAGAT CCGCGAGGAT GTCCAGGACA TCGTCGCAAC GGTCCATCAG
GACGGCGACG AGGCCCTTCG GGACTTCAGT CGCCGGTTCG ACGGCGTCGA GATCGACGAC
TTCGACGTCA CCGAGCAGGC CGCGAAGGCC TACGAGGCGA TCGACGACGA GGTACGCGAG
GCGATCGAGA CAGCCGCCGC AAACATCCGC GCGTTCCACG AACGACAGGT CCCCGAGGAC
TGGTCTGTCG AGCCAAGCGA GGGGCGCGAA CTCGGCAGGA AGTACTACCC GCTCGATTCG
GCAGGGGTCT ACGCACCCGG CGGCACGGCA GCCTATCCCT CTAGCGTGCT GATGGGCGTC
GTGCCAGCGA AGGTCGCCGA CGTCGAACAC GTCGCCGTGG CGACCCCGCC GGCCGAGGAG
ATCAATCCGG TCACGATGGC GGCGATGCAC GCCGCCGGTG CGGACGCCGT CTATCAGATC
GGCGGCGCAC AGGCCATCGC TGCACTCGCC TACGGCACCG ACTCGATCGA CCCCGTCGAC
GTGATCGTCG GCCCGGGCAA CCGCTGGGTC ACCGCCGCGA AGGCCGAAGT CCGCGGCGAC
GTCCGGATCG ACATGCTTGC CGGCCCCAGC GAGGTGCTGA CGCTGACCGA CGCGACGGCA
GACCCCGAGA TCGTCGCCGC CGAAGTGGTC GCACAGGCCG AACACGATCC CAACGCCGGG
GTTGTCGCGG TGACGCCCGA TTCCGACCAC GCCGAGGCTG TCGCCGCGGA GATCGACCGC
CAGGCACCCC AGCGCGAACG CGCCGAGATC GTGCGAGAGG CACTTGCAAA CGACGCCAGC
GGCGTCTTTC TCGCCGATTC GATGGATGCG GCCGTGGCGT TCAGCGAGGA CTACGCGCCC
GAGCACATCT TCGTCCACGC GGCGAACGAG CGCGAGCTGC TCGACCGGAT CACGAACTAC
GGGAGTGCGT TCGTCGGCGA GTTCACCCCG GTTGCCGCGG GTGACTACGC CAGTGGTACC
AACCACGTCC TCCCGACCGG CGGATCGGCA GCGATCGCAA GCGGGCTCTC GGTCGATGAC
TTCGTCCGTC CGGCGACGTA TCAGCAACTC TCCGAGGACG GGCTCGAGAC GCTCCGGGAG
ACGATCACCA CACTGGCCGA AGCCGAAGGA CTCGAGGCCC ACGCACAGAG CGTCGAAACG
CGCTTTGAGG ACTGA
|
|---|
| Protein sequence | MDVQSISDLD DRRRRALFER DSGIGEIRED VQDIVATVHQ DGDEALRDFS RRFDGVEIDD
FDVTEQAAKA YEAIDDEVRE AIETAAANIR AFHERQVPED WSVEPSEGRE LGRKYYPLDS
AGVYAPGGTA AYPSSVLMGV VPAKVADVEH VAVATPPAEE INPVTMAAMH AAGADAVYQI
GGAQAIAALA YGTDSIDPVD VIVGPGNRWV TAAKAEVRGD VRIDMLAGPS EVLTLTDATA
DPEIVAAEVV AQAEHDPNAG VVAVTPDSDH AEAVAAEIDR QAPQRERAEI VREALANDAS
GVFLADSMDA AVAFSEDYAP EHIFVHAANE RELLDRITNY GSAFVGEFTP VAAGDYASGT
NHVLPTGGSA AIASGLSVDD FVRPATYQQL SEDGLETLRE TITTLAEAEG LEAHAQSVET
RFED
|
|---|
| |