Gene Huta_0438 details

Gene Information

• Locus tag: Huta_0438
• Symbol: sucC
• ID: 8382705
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 431084
• End bp: 432229
• Gene Length: 1146 bp
• Protein Length: 381 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644971500
• Product: succinyl-CoA synthetase subunit beta
• Protein accession: YP_003129358
• Protein GI: 257051525
• COG category: [C] Energy production and conversion
• COG ID: [COG0045] Succinyl-CoA synthetase, beta subunit
• TIGRFAM ID: [TIGR01016] succinyl-CoA synthetase, beta subunit

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.179512
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGACTCC ACGAGTACCA GGCAAAGCGC GTATTCGCCG AGGCCGGGAT TCCGGTCCCA 
GATGCAACTC TCGCGACGAC CGTCGAGGAA GCGGTCGACG CGGCAGGAGA GATCGGCTTC 
CCGGTGGCGA TCAAAGCACA GGTACACGTC GGCGGGCGGG GCAAGGCCGG CGGGATCAAA 
CTTGCCGAGG ACGCCGACGA GGCTCGGGAA GCGGCCACGG ACATCCTCGG GATGGATCTG 
AAGGGCTACA CCGTCGATCG CGTCTTGGTC GAGCAAGCGG TCGACTTCGT GAACGAACTC 
TACGTCGGCG TGACGATGGA CCGCGGGGCC GGCAAGCCGG TCGCGATGGT CTCGACGAAG 
GGCGGGGTCA ACATCGAGGA GGTCGCCGCC GAGAACCCCG ACGCCATCGC GCGCGAACAC 
GTCGATCCGG CCTACGGCCT CCACCCCTAC CAGGCTCGCA AGGCTGTCTA CGACGCGGGC 
GTCGACCGCG AGGTGGCCGG TGATGTCGCC TCGATCCTCT CGACGCTGTA CGACCTTTGG 
GACGAGAAGG ACGGCAGCGA CGCCGAGATC AACCCCGTGA TGATCACGGA CGACGACGAG 
GTCATCGCCG CCGACGCCGT GTTCAACGTC GACGACGACG CGCTCTTCCG GCAGTCCGAG 
ATCGCCCAAC TGGAAGGCGA AACGACCGAC GACGACCTCG AGGCGATGGC CAACGAGTAC 
GGCTTCGATT ACGTCCGGCT TTCGGGCAAC GTCGGCATCA TCGGCAACGG CGCGGGCCTG 
GTGATGACGA CGCTCGATCT CGTCGATCAT TACGGCGGAT CGCCCGCGAA CTTCCTCGAC 
ATCGGCGGCG GGGCCAAAGC TGGCCGCGTC CGCAACGCCC TGGAGGTCGT CTTCGCCGAC 
GACAACGTCG ACAGCGTCGT GTTCAACATC TTCGGCGGGA TCACCCGCGG CGACGAGGTC 
GCCCGCGGTA TCAACGAGGC CCTCGAAGAG TTCGACACGA TTCCCAACCC GGTCACCGTT 
CGACTCGCCG GCACCAACAG CGTTCAAGGC ATGGAGATAC TCAACACCGA TCTCGTGACC 
GTCGAGGAAA CGCTCGAAGA AGCCGTCCAG CGTGCTGTCG CCGACGCCGA GGAGGTGGCA 
CAATGA 

 

Protein sequence

MRLHEYQAKR VFAEAGIPVP DATLATTVEE AVDAAGEIGF PVAIKAQVHV GGRGKAGGIK 
LAEDADEARE AATDILGMDL KGYTVDRVLV EQAVDFVNEL YVGVTMDRGA GKPVAMVSTK 
GGVNIEEVAA ENPDAIAREH VDPAYGLHPY QARKAVYDAG VDREVAGDVA SILSTLYDLW 
DEKDGSDAEI NPVMITDDDE VIAADAVFNV DDDALFRQSE IAQLEGETTD DDLEAMANEY 
GFDYVRLSGN VGIIGNGAGL VMTTLDLVDH YGGSPANFLD IGGGAKAGRV RNALEVVFAD 
DNVDSVVFNI FGGITRGDEV ARGINEALEE FDTIPNPVTV RLAGTNSVQG MEILNTDLVT 
VEETLEEAVQ RAVADAEEVA Q