Gene Huta_0424 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0424 
Symbol 
ID8382691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp417292 
End bp417963 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content66% 
IMG OID644971486 
Productbeta-lactamase domain protein 
Protein accessionYP_003129344 
Protein GI257051511 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.65466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCACGG AACTCGCGGA TGGAATCTGG TGGTTCGACC TCCGAGGTGT CAACGCGTAT 
CTCCTCGAAG ACAAGACGGG GGCGACGCTT ATCGACGCTG GCGGACCGTG GACCCGGCGG 
GCACTGGTCA AGGAGTTGGC AGCGGTGGAT ACCGATCCTC GGAAGGCGAC CCAAATCGCC 
CTCACACACT ACGATATCGA TCACGTCGGT GGGTTGGGTG CTTGTCGAAA GGATGGGACA 
GTATACGCCG GGCAACCGGA TGCCGACGTC CTCAGTGGAG ATCGCCGGCC AGACTGGGCC 
AACCGGAAGA CCGCGTTCCA GCGAGCGGCC GCGCTCGTCC TATCCTCGCC CGAGCAGTCG 
ATCGAGACGG TTGCCGATGG CGATCGGGTC GGTGGCCTCA CCGTCTACGA GACGCCGGGT 
CATACCCCCG GGCATCTGGC GTTCGTCAGC GAGGAGCGAT CCGTGGCGTT CGTCGGCGAC 
CTGGTCCGGG AGCGCGAGGG CCGACTCGAA GCGTCGCCGT GGGCGTTGAG CCACGACACC 
GACGCCGTCG AATCGAGCAT CCGCCGGCTG GCGGAGTTGG AACTCGACGT CGACATCCTG 
GCGATGGGAC ACGGGACGCC CTTCGTCGAA CGCGGGGCGG CTCACCTTGC CGATCTCGCC 
GCCCGACTCT AA
 
Protein sequence
MATELADGIW WFDLRGVNAY LLEDKTGATL IDAGGPWTRR ALVKELAAVD TDPRKATQIA 
LTHYDIDHVG GLGACRKDGT VYAGQPDADV LSGDRRPDWA NRKTAFQRAA ALVLSSPEQS 
IETVADGDRV GGLTVYETPG HTPGHLAFVS EERSVAFVGD LVREREGRLE ASPWALSHDT 
DAVESSIRRL AELELDVDIL AMGHGTPFVE RGAAHLADLA ARL