Gene Huta_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0402 
Symbol 
ID8382669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp396548 
End bp396856 
Gene Length309 bp 
Protein Length102 aa 
Translation table11 
GC content65% 
IMG OID644971464 
ProductTranscription factor TFIIB cyclin-related 
Protein accessionYP_003129322 
Protein GI257051489 
COG category[K] Transcription 
COG ID[COG1405] Transcription initiation factor TFIIIB, Brf1 subunit/Transcription initiation factor TFIIB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.463752 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTACCGCG CCCGTGATCA GGTGGACAAC GAGAAATGGG TCGAGGCCAT CGAAACCATC 
GGTGACCGCC TCGATCTGAG TGAGACTGCC CGCTCGCGCG CGACGGACGT CTTTCTCTCG
AATGTCCCCG AGAAGGATCG CTCCAAACGG GCCGTCCTCG CCGCCAGCGT GTACGTCGGC
GCGCTGGTCG CCGGCGAACG ACACTCGCAG TCGGCCGTCG CCGAGGCCAC CGACGTCTCG
CGGCTGACGA TCCAGCAACG CTGGAAAACA CTTCTCGAAG AAACCGGCTT CGACGCGCCC
GACTGGTGA
 
Protein sequence
MYRARDQVDN EKWVEAIETI GDRLDLSETA RSRATDVFLS NVPEKDRSKR AVLAASVYVG 
ALVAGERHSQ SAVAEATDVS RLTIQQRWKT LLEETGFDAP DW