Gene Huta_0352 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0352 
Symbol 
ID8382616 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp339042 
End bp339824 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID644971411 
ProductABC transporter related 
Protein accessionYP_003129272 
Protein GI257051439 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGTGC CGGCGATCGA GACCGACGGA CTCACGAAAC AGTATGGGGA TCTCACTGCA 
CTCGCTGACC TCTCACTCAC AGTCGAGTCG GGCGCGCTTT TCGGGTTGCT CGGGCCGAAC
GGCTCGGGCA AGACCACGAC GATCGAGATC CTGACCGGCC AGCGCAAACC TGACGCCGGG
ACTGCCAGCG TGCTGGGTAT CGATCCCGTC GCCAACCCGC GCGAGGTGCG CGAGGTCGTC
GGCATTCTCC CCGAGCGCGA GGATCCGCCG AGTTTCCTCA CGCCGCGGGA GTATCTCCGG
TTTATCGGCG ACGTGCGCGA ACTCGACGAC ATCGACGATC GCATCGAGCG GTGGGCCGAT
CGTCTCGAGT TCAGCGAAAC ACTGGATACC GTTGCCGCTG ACCTTTCCGA GGGCCAACGC
CAGCGCGTCA TGCTCGGGGG GACGTTCGTT CACGATCCCG AACTGGTGTT CATCGACGAA
CCGCTGGTCA ATCTCGATCC AATCCTCCAG GAGCGAGTCA AACGCGAGTT GCGCGCCTAC
TGTAACAACG GCAACACGCT GTTTCTGTCG ACGCACTTCG TCGACGTGGC TGCCGACCTC
TGCGATCGGG TCGGCATCCT CGACGGCGGA CACCTAAAGG GGACACAGGA GACGGCCGAG
TTCGACGACG ATGACCTCCT GTCGTACTTC ATGAAAACTG TCGAGGGCGG CGACATGGCG
ATTGCAGCCG GCCGATCCGG TGGTGTGGCG GCGGAACCGA ACGAGGGGGG TCCGGATTCG
TGA
 
Protein sequence
MTVPAIETDG LTKQYGDLTA LADLSLTVES GALFGLLGPN GSGKTTTIEI LTGQRKPDAG 
TASVLGIDPV ANPREVREVV GILPEREDPP SFLTPREYLR FIGDVRELDD IDDRIERWAD
RLEFSETLDT VAADLSEGQR QRVMLGGTFV HDPELVFIDE PLVNLDPILQ ERVKRELRAY
CNNGNTLFLS THFVDVAADL CDRVGILDGG HLKGTQETAE FDDDDLLSYF MKTVEGGDMA
IAAGRSGGVA AEPNEGGPDS