Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0352 |
Symbol | |
ID | 8382616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 339042 |
End bp | 339824 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644971411 |
Product | ABC transporter related |
Protein accession | YP_003129272 |
Protein GI | 257051439 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGTGC CGGCGATCGA GACCGACGGA CTCACGAAAC AGTATGGGGA TCTCACTGCA CTCGCTGACC TCTCACTCAC AGTCGAGTCG GGCGCGCTTT TCGGGTTGCT CGGGCCGAAC GGCTCGGGCA AGACCACGAC GATCGAGATC CTGACCGGCC AGCGCAAACC TGACGCCGGG ACTGCCAGCG TGCTGGGTAT CGATCCCGTC GCCAACCCGC GCGAGGTGCG CGAGGTCGTC GGCATTCTCC CCGAGCGCGA GGATCCGCCG AGTTTCCTCA CGCCGCGGGA GTATCTCCGG TTTATCGGCG ACGTGCGCGA ACTCGACGAC ATCGACGATC GCATCGAGCG GTGGGCCGAT CGTCTCGAGT TCAGCGAAAC ACTGGATACC GTTGCCGCTG ACCTTTCCGA GGGCCAACGC CAGCGCGTCA TGCTCGGGGG GACGTTCGTT CACGATCCCG AACTGGTGTT CATCGACGAA CCGCTGGTCA ATCTCGATCC AATCCTCCAG GAGCGAGTCA AACGCGAGTT GCGCGCCTAC TGTAACAACG GCAACACGCT GTTTCTGTCG ACGCACTTCG TCGACGTGGC TGCCGACCTC TGCGATCGGG TCGGCATCCT CGACGGCGGA CACCTAAAGG GGACACAGGA GACGGCCGAG TTCGACGACG ATGACCTCCT GTCGTACTTC ATGAAAACTG TCGAGGGCGG CGACATGGCG ATTGCAGCCG GCCGATCCGG TGGTGTGGCG GCGGAACCGA ACGAGGGGGG TCCGGATTCG TGA
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Protein sequence | MTVPAIETDG LTKQYGDLTA LADLSLTVES GALFGLLGPN GSGKTTTIEI LTGQRKPDAG TASVLGIDPV ANPREVREVV GILPEREDPP SFLTPREYLR FIGDVRELDD IDDRIERWAD RLEFSETLDT VAADLSEGQR QRVMLGGTFV HDPELVFIDE PLVNLDPILQ ERVKRELRAY CNNGNTLFLS THFVDVAADL CDRVGILDGG HLKGTQETAE FDDDDLLSYF MKTVEGGDMA IAAGRSGGVA AEPNEGGPDS
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