Gene Huta_0349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0349 
Symbol 
ID8382613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp336426 
End bp336986 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content59% 
IMG OID644971408 
Productintracellular protease, PfpI family 
Protein accessionYP_003129269 
Protein GI257051436 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID[TIGR01382] intracellular protease, PfpI family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCA AACAACTCCT GATGATCGTC GGCGATTTCG GTGAAGACTA CGAGATCATG 
GTACCGTTCC AGGCCCTGCA GGCCGTCGGC CACGAAGTCG ACGCGGTCTG TCCCGAAAAG
GAGGGCGAAG AGACGATCAA GACGGCGATT CATGATTTCC GTGGCGACCA GACCTATCTC
GAAGAACGGG GCCACGATTT CGAATTGACC GCAACGATGG CCGACGTCGA CCCGACCGAA
TACGACGGCC TGGTAGTTCC CGGTGGACGA GCTCCCGAAT ACCTTCGTGG ATACGATGTG
GTGATCGAAG CTGTCCAGCA CTTTTTCGAG GCCGACAAAC CAGTCGCCTC GATCTGTCAT
GGCCCCCAGA TCCTCGCCGC AGCTGGCGTC CTCGATGGCT ACGAAATGAC GGCGTATCCG
GCAGTCCGGC CGGAAGTCGA GGCTGCCGGC TGTTCGTGGG TTGACGGCGT CGTCCGGGAC
GACAATCTGG TGACTGGCCA GGCCTGGCCC GACCACCCCG AATGGATCGC GACGTTCCTT
GAACTCCTCG AAGAACAATA A
 
Protein sequence
MESKQLLMIV GDFGEDYEIM VPFQALQAVG HEVDAVCPEK EGEETIKTAI HDFRGDQTYL 
EERGHDFELT ATMADVDPTE YDGLVVPGGR APEYLRGYDV VIEAVQHFFE ADKPVASICH
GPQILAAAGV LDGYEMTAYP AVRPEVEAAG CSWVDGVVRD DNLVTGQAWP DHPEWIATFL
ELLEEQ