Gene Huta_0343 details

Gene Information

• Locus tag: Huta_0343
• ID: 8382607
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 331146
• End bp: 331865
• Gene Length: 720 bp
• Protein Length: 239 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 644971402
• Product: Lysine exporter protein (LYSE/YGGA)
• Protein accession: YP_003129263
• Protein GI: 257051430
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAGATG TACTGGTAAC CGGGCTTGCC GGGTCGATAT TCGGGCTGGC GCTGGCCGCG 
CCACCGGGGC CGATGAACGC CGTCATCGCC GAGGAAAGCG TCGTGGGCGG CTTCCGGGCC 
GGCGTCACTG CCGGGCTGGG GGCGATGGTG GCCGACGCGA CGTTTTTCGT CCTCTCGGTG 
CTCGGCGTTG TCGCGATCGT CCAGGAAGCG ACGCTCCTGC AGGGAACGAT GGTCGGGATC 
GGCGGCGTGT TGATGCTGTA CTTCGCGATC GACGCCGTCC GTGAACTCGA CCGGACGTTT 
ACCACGTTCG ACGAGGACGC GACCACCGGG GCCGGTCACA GCGGTGACCG ACCCGACGCA 
CGAGGGTTTC GGCGGGCGTT CGTGCTTGCA CTCACGAACC CGTATCAGAT CATCTTCTGG 
CTGACTGTCG GCGTCGGCCT TCTCACGCCG GGCACGGTCG ACGTCCTCTC CCAGACGCCG 
TACGTGGGCG GGCACCTCGA GGGGCTGCTC GTCGTTCGAA CAGGTAAGCC GACGCTGCTC 
GTGGGCTTTT TCGCCGGGAT CGGCGTCTGG ATCGTCGGCT TCCCGGCGAC GCTGGTGACT 
GCCGGTCGGC GAGTCGACCG CTTCGCTCCG GCGGTCGCCG TCCTCAGCGC GGTCTTTCTG 
GCCGGCTTCG GCGTGTTCTT CCTGTACGAC GCCCTGTCGA CGGTCGGTCT CGTGGGATGA 

 

Protein sequence

MIDVLVTGLA GSIFGLALAA PPGPMNAVIA EESVVGGFRA GVTAGLGAMV ADATFFVLSV 
LGVVAIVQEA TLLQGTMVGI GGVLMLYFAI DAVRELDRTF TTFDEDATTG AGHSGDRPDA 
RGFRRAFVLA LTNPYQIIFW LTVGVGLLTP GTVDVLSQTP YVGGHLEGLL VVRTGKPTLL 
VGFFAGIGVW IVGFPATLVT AGRRVDRFAP AVAVLSAVFL AGFGVFFLYD ALSTVGLVG