Gene Huta_0341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0341 
Symbol 
ID8382605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp329313 
End bp330221 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID644971400 
ProductRNA methylase, NOL1/NOP2/sun family 
Protein accessionYP_003129261 
Protein GI257051428 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0144] tRNA and rRNA cytosine-C5-methylases 
TIGRFAM ID[TIGR00446] NOL1/NOP2/sun family putative RNA methylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACGTGT TGCAGCGCTA CGAGTCGCTT TTCGAGGACT GGTCCGGATT CCGTGCTGCC 
TGTCGCCGCC CGCTCCCGTC GGTCGTCCGC GTCAACACGC TCAAGACGAC CGTCGAGCGG
GCGAAGACAG CCCTGGAGAC GGAGGGGATC ACCTACGAGA CGGTCGACTG GCACGACGGT
TTGTTGCGGT TGCCGGACGA CAATCCTGGA TCGAACTGGC CGTACGTGCA GGGGTGGCTC
CACGGTCAGG AGGAAGTCTC GGCACTGCCG CCGGTCGTGC TCGATCCCGA CCCGGGTGAT
CGCGTCTGGG ACGCCACGGC CGCACCGGGC AGCAAGACGA CCCAACTCGC TGCGCTGATG
GACGACGAGG GGGCAATCGT GGCGACGGAC AACAACCTCG GTCGGCTGTC GGCGTTGCGG
TCGAACGCCG AACGCCTCGG CGTCACAAAT CTTGCAGTTA CGAACGAGGA CGCGCGCAAC
CACTCGCTGA AGCCGTTCGA CGGCAGGCAA TACGATCACG CACTCGTCGA CGCGCCCTGC
TCGTGTGAGG GGACGATCCG GAAGAACCCG GATGCACTGG CGCAGTGGTC GCTCGATCAC
GTTTCCGGCA TCGCCGGTGC CCAGAAGGGG ATCCTCCGGC GCGCCGTCGA GGTCACCAAG
CCCGGCGGGA CCGTTGTCTA CTCGACGTGC ACGTTCGCTC CCGAGGAGAA CGAGGCCGTC
CTCGACCACG CCCTCGAAGA GACCGATGCC CGGCTCGTCT CGAGCGACCT CCCGCTCGAC
AGTCGACCCG GCGTGACCGA GTGGGACGGC GAGACCTTCG ATCCGAGCGT CCGGAAGGCC
CACCGGGTCT ATCCCCACCT CAATGACACG GGCGGGTTCT TCGTCGCGAA ACTGGAGGTG
CCAGCATGA
 
Protein sequence
MDVLQRYESL FEDWSGFRAA CRRPLPSVVR VNTLKTTVER AKTALETEGI TYETVDWHDG 
LLRLPDDNPG SNWPYVQGWL HGQEEVSALP PVVLDPDPGD RVWDATAAPG SKTTQLAALM
DDEGAIVATD NNLGRLSALR SNAERLGVTN LAVTNEDARN HSLKPFDGRQ YDHALVDAPC
SCEGTIRKNP DALAQWSLDH VSGIAGAQKG ILRRAVEVTK PGGTVVYSTC TFAPEENEAV
LDHALEETDA RLVSSDLPLD SRPGVTEWDG ETFDPSVRKA HRVYPHLNDT GGFFVAKLEV
PA