Gene Huta_0310 details

Gene Information

• Locus tag: Huta_0310
• Symbol: dnaK
• ID: 8382574
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 293642
• End bp: 295576
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 644971369
• Product: molecular chaperone DnaK
• Protein accession: YP_003129230
• Protein GI: 257051397
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAGCA ACAAGATTCT CGGAATCGAC CTGGGAACGA CCAACTCAGC GTTCGCAGTG 
ATGGAGGGTG GCGACCCGGA GATCATCGTC AACAGCGAAG GCGATCGGAC GACGCCCTCG 
GTCGTGGCGT TCGACGACGG CGAGCAACTC GTCGGCAAGC CGGCGAAGAA CCAGGCCGTC 
AAGAACCCTG ATGAGACGAT TCAGTCGATC AAGCGTCACA TGGGCGAGGA AGACTACACC 
GTTTCCCTGG ACGGTGAGGA GTACACGCCC GAGCAGGTCT CGGCGATGAT CCTCCAGAAG 
ATCAAACGCG ACGCCGAGGA GTACCTCGGT GACGAGATCG AGAAGGCCGT CATCACCGTC 
CCGGCGTACT TCAACGACCG CCAGCGCCAG GCCACGAAGG ACGCCGGCGA GATCGCCGGC 
TTCGAAGTCG ACCGCATCGT CAACGAGCCG ACAGCGGCCT CGATGGCCTA CGGGCTCGAC 
GACGAGTCCG ACCAGACGGT GCTCGTCTAC GACCTGGGTG GCGGGACGTT CGACGTCTCG 
ATTCTCGACC TCGGTGGCGG CGTCTACGAA GTCGTCGCGA CCAACGGTGA CAACGACCTC 
GGTGGCGACG ACTGGGACCG GGCGATCATC GACTGGCTGG CCGAGGACTT CGCCGAGGAG 
CACGGCATCG ACCTCCGGGA GGACCGCCAG GCCCTCCAGC GGTTGAAGGA CGCCGCCGAG 
GAAGCCAAGG TCGAACTCTC CTCCCGGAAA GAGACCGAGA TTAACCTGCC ATTTATCACC 
TCTACTGACG ACGGTCCGGT CCACCTGGAG ACGGACATCA CCCGCGCGAA GTTCGAGAGC 
CTGACGAGTG ACCTGATCGA ACGCACCGTC GAGCCGACCG AGCAGGCTCT TGAGGACGCC 
GACTACTCGA AGTCGGATAT CGACGAGGTG CTGCTTGTGG GCGGATCGAC CCGCATGCCC 
CAGGTTCAGG AGAAGGTCGA GGAACTCACC GGCCAGGAAC CGAAGAAGAA CGTCAACCCC 
GATGAGGCCG TCGCGCTGGG CGCGGCGATC CAGGGCGGGG TCCTCTCGGG CGACGTCGAC 
GACATCGTCC TGCTCGACGT GACGCCCCTC AGCCTCGGTG TCGAGGTCAA GGGCGGCCTC 
TTCGAGCGTC TGATCGAGAA GAACACGACG ATCCCGACCG AGGAGTCGAA GATCTTCACC 
ACCGCCGCGG CCAACCAGAC CTCGGTCCAG ATCCGCGTCT TCCAGGGCGA ACGCGAGATC 
GCCGAGGAGA ACGAACTGCT TGGAGCCTTC ATGCTGCAGG GCATCCCGCC GGCTCCGGCC 
GGGACGCCCC AGATCGAGGT CACCTTCTCG ATCGACGAGA ACGGCATCGT CAACGTCTCA 
GCCGAGGACC AGGGCTCGGG CAACTCCGAG GAGATCACCA TCGAGGGTGG CGTCGGCCTG 
AGCGACGAGG AGATCGAGGA GATGCAGGAG GAAGCCGAGG AACACGCCGA AGAGGACCAG 
CAGCGCCGCG AGCGCATCGA GGCCCGCAAC GAGGCCGAGA GCGCCATCCA GCGCGCCGAG 
ACGCTGCTGG AGGAGAACGA GGATGCTGTC GACGATGACC TCCGTGAGGA CATCGAATCC 
GAGATCGAAG CGGTCCAGGA AACCCTCGAC GACGACGATG CGACCAAGGA GGATTACGAG 
CAAGCGGTCG AGGCGCTCAC CGAATCCCTC CAGGAGATCG GCAAACAGAT GTACGACCAG 
GCTGGCGCGG AAGGTGCTGC AGGCGCTGGT GCGGCCGGTG CAGGTGCCGG TGGCATGGGC 
GGCATGGGCG GCGCTGGTCC CGCAGGCGCG GGTGGCCCCG CCGGTGGGCC GGGCGGCGCT 
GGCGACGAAG CTGGCGAGGA GTATGTCGAC GCCGACTTCG AAGAGGTCCA AGACGAAGAC 
GACGAAGACG AGTAA 

 

Protein sequence

MASNKILGID LGTTNSAFAV MEGGDPEIIV NSEGDRTTPS VVAFDDGEQL VGKPAKNQAV 
KNPDETIQSI KRHMGEEDYT VSLDGEEYTP EQVSAMILQK IKRDAEEYLG DEIEKAVITV 
PAYFNDRQRQ ATKDAGEIAG FEVDRIVNEP TAASMAYGLD DESDQTVLVY DLGGGTFDVS 
ILDLGGGVYE VVATNGDNDL GGDDWDRAII DWLAEDFAEE HGIDLREDRQ ALQRLKDAAE 
EAKVELSSRK ETEINLPFIT STDDGPVHLE TDITRAKFES LTSDLIERTV EPTEQALEDA 
DYSKSDIDEV LLVGGSTRMP QVQEKVEELT GQEPKKNVNP DEAVALGAAI QGGVLSGDVD 
DIVLLDVTPL SLGVEVKGGL FERLIEKNTT IPTEESKIFT TAAANQTSVQ IRVFQGEREI 
AEENELLGAF MLQGIPPAPA GTPQIEVTFS IDENGIVNVS AEDQGSGNSE EITIEGGVGL 
SDEEIEEMQE EAEEHAEEDQ QRRERIEARN EAESAIQRAE TLLEENEDAV DDDLREDIES 
EIEAVQETLD DDDATKEDYE QAVEALTESL QEIGKQMYDQ AGAEGAAGAG AAGAGAGGMG 
GMGGAGPAGA GGPAGGPGGA GDEAGEEYVD ADFEEVQDED DEDE