Gene Huta_0308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0308 
Symbol 
ID8382572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp291318 
End bp292667 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content66% 
IMG OID644971367 
Producttype III restriction protein res subunit 
Protein accessionYP_003129228 
Protein GI257051395 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1061] DNA or RNA helicases of superfamily II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTCGCG TCACGTTGAC CTACGAGGAC GGGACGGTCC GCATCGACGG GCTGGACGCA 
GAAACAGGCG AGTCCCTCGC AGATGTCGAG CGCGACGAAC GTTCGAAATC CTGGCGAGCG
CCCGGCTTTC GATACGCGGC GGTCCGGGAC GCCATCGAGG CGACGGGCAC GACAGTAGCG
GACCGCGTTT TCGACCTTCC CACACTCGCT CTCGATTCGA CCTACGAACT CCGGTCGTAC
CAGGAGGAGG CTTTCGATGC CTGGCGTACT GGTGACGATC GTGGTGTCCT CGAACTCCCG
ACCGGGAGTG GCAAGACCAT CATCGGGATC GCGGCGATCG AAGCGCTCGA CACGCCGACA
CTCGTGGTCG TGCCGACGAT CGATCTGCTG GAGCAGTGGC GCGAGGAACT GGAGACGGAG
TTCGACGTTT CGATCGGGCA ACTCGGCGGT GGCGAACAGC GACTCGAATC CCTGACGGTC
GCCACGTACG ATTCGGCGTA TCTGCGGGCC GACGAGATCG GCGACCGCTT CGGGCTGGTG
ATCTTCGACG AAGTCCATCA CCTTGGCGGC GAAGGCTACC GTGACATCGC AAGACTGCTC
GCCGCGCCCG CCCGGCTGGG GCTGACCGCA ACATTCGAGC GACCGGATGG CGCTCACGAG
GTCGTTACCG AGTTGATCGG CGAGGTCGTC TATCGCCTCG ATCCCGATGA ACTGGCGGGC
GGACACCTCG CGCCGTACGA CGTCAAACGC CTGGAAGTCA CACTCACCGA CGACGAGCGG
GCCAGCTACG AGCGCAACCA GGAGACCTTC ACCGACTACC TCGCTCGATC GAACATCGAC
ATGCATAGCG GCGAGGACTA CCAGCAACTC GTCATCCGGT CGGGGACCGA CCCGGCGGCC
CGGGAGGCCT TGCTCGCCAA GGAGCGGGCC CGCTCGATCG TCCGGACGGC CGAACGCAAG
GTCGACACCC TCGCTGAATT GCTCGATCGG CACCCCGACG ACCGGGTGCT CGTCTTCACC
GCCTCGACCG ACTTCGTCTA TCGCCTCTCC GAGCGGTTCC TCCGACCGGC GATCACCCAC
GAGACATCGA CTGCGGAGCG CAAAGAGATC CTTCGGGGGT TCCGGACCGG GGCCTACTCG
ACGGTGATCA CGGCGAACGT CCTCGACGAG GGGATCGACG TTCCCGACGC GAACGTGGCG
GTTCTGCTTG CTGGCAGCGG GAGTCAGCGG GAGTTTACCC AGCGGCTTGG CCGGATTCTT
CGGCCGACCG AGGACGGCGG GCGCGCCCTG CTCTACGAGG TCGTCTGTGC CGACACGGCC
GAGGAACGGG TCGCACGCCG TCGGCGCTGA
 
Protein sequence
MARVTLTYED GTVRIDGLDA ETGESLADVE RDERSKSWRA PGFRYAAVRD AIEATGTTVA 
DRVFDLPTLA LDSTYELRSY QEEAFDAWRT GDDRGVLELP TGSGKTIIGI AAIEALDTPT
LVVVPTIDLL EQWREELETE FDVSIGQLGG GEQRLESLTV ATYDSAYLRA DEIGDRFGLV
IFDEVHHLGG EGYRDIARLL AAPARLGLTA TFERPDGAHE VVTELIGEVV YRLDPDELAG
GHLAPYDVKR LEVTLTDDER ASYERNQETF TDYLARSNID MHSGEDYQQL VIRSGTDPAA
REALLAKERA RSIVRTAERK VDTLAELLDR HPDDRVLVFT ASTDFVYRLS ERFLRPAITH
ETSTAERKEI LRGFRTGAYS TVITANVLDE GIDVPDANVA VLLAGSGSQR EFTQRLGRIL
RPTEDGGRAL LYEVVCADTA EERVARRRR