Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0300 |
Symbol | |
ID | 8382564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | - |
Start bp | 284386 |
End bp | 285168 |
Gene Length | 783 bp |
Protein Length | 260 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644971359 |
Product | hypothetical protein |
Protein accession | YP_003129220 |
Protein GI | 257051387 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3264] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0317825 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTGACA TCCCCGATCT CATACGCACG CTTTTCTCCG AGGAGACGGC GGTCGTCGTG GCGATCTTTG TCCTGTTTAT CGGTACTGTT CTCAGTTATC TCGTCTGGCG CATGACCCAT TCGGTTCTGG AACAGGCTGG GATCCCCGAG GCCGTCGAGG GAACGGTCTT CGAGCGGACA CTCCAGAACG TCGGGTTCTC GACGGTCGGG TTGGTCGCCC AGCTCGCGGC GATTTTCGTG TACGCGCTGG CGATATTCAT CGCCATCCAG ACGGCCCAGC TCAATTACCC GACCCAGTTC TGGGCCGGAT TCAGTGCCTA CCTCTCGCAG TTGTTCATCG CCGCTCTCGC AGTGATCGCC GGCCTGATCC TGGGTGACAA AGCCTCTCTG GCAGTCAGCG AACGACTCCG TAGCATCAAA CTCCCGCAGA TCTACGTCCT GGCCCCGCTC GTGAAATACA GTATCTTCTA CGTGGCCGCA CTGGTCGCCC TTGGGCAACT CGGCGTCGCA ACGACGGCCC TGCTCGTCCT GTTGAGCGTC TACGTCTTCG GGATACTGTT TCTGGGCGGG TTGGCGTTCA AACATCTGCT GGCCGCCGGC GCGGCCGGGA TCTACCTGCT GCTGTCGGAA CCCTATTCGA TCGGCGACGA GGTGGAGATC GGCGATCGAC GCGGCGTCGT CCAGGAGATC GACATGTTCG TGACGCACGT CGAAAACGAC GACGCCGAGT TCATCGTCCC GAACCAGCGC GTCTTCCAAT CAGGCGTCAC CCGCTTCAGG TGA
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Protein sequence | MVDIPDLIRT LFSEETAVVV AIFVLFIGTV LSYLVWRMTH SVLEQAGIPE AVEGTVFERT LQNVGFSTVG LVAQLAAIFV YALAIFIAIQ TAQLNYPTQF WAGFSAYLSQ LFIAALAVIA GLILGDKASL AVSERLRSIK LPQIYVLAPL VKYSIFYVAA LVALGQLGVA TTALLVLLSV YVFGILFLGG LAFKHLLAAG AAGIYLLLSE PYSIGDEVEI GDRRGVVQEI DMFVTHVEND DAEFIVPNQR VFQSGVTRFR
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