Gene Huta_0300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0300 
Symbol 
ID8382564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp284386 
End bp285168 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content61% 
IMG OID644971359 
Producthypothetical protein 
Protein accessionYP_003129220 
Protein GI257051387 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3264] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0317825 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTGACA TCCCCGATCT CATACGCACG CTTTTCTCCG AGGAGACGGC GGTCGTCGTG 
GCGATCTTTG TCCTGTTTAT CGGTACTGTT CTCAGTTATC TCGTCTGGCG CATGACCCAT
TCGGTTCTGG AACAGGCTGG GATCCCCGAG GCCGTCGAGG GAACGGTCTT CGAGCGGACA
CTCCAGAACG TCGGGTTCTC GACGGTCGGG TTGGTCGCCC AGCTCGCGGC GATTTTCGTG
TACGCGCTGG CGATATTCAT CGCCATCCAG ACGGCCCAGC TCAATTACCC GACCCAGTTC
TGGGCCGGAT TCAGTGCCTA CCTCTCGCAG TTGTTCATCG CCGCTCTCGC AGTGATCGCC
GGCCTGATCC TGGGTGACAA AGCCTCTCTG GCAGTCAGCG AACGACTCCG TAGCATCAAA
CTCCCGCAGA TCTACGTCCT GGCCCCGCTC GTGAAATACA GTATCTTCTA CGTGGCCGCA
CTGGTCGCCC TTGGGCAACT CGGCGTCGCA ACGACGGCCC TGCTCGTCCT GTTGAGCGTC
TACGTCTTCG GGATACTGTT TCTGGGCGGG TTGGCGTTCA AACATCTGCT GGCCGCCGGC
GCGGCCGGGA TCTACCTGCT GCTGTCGGAA CCCTATTCGA TCGGCGACGA GGTGGAGATC
GGCGATCGAC GCGGCGTCGT CCAGGAGATC GACATGTTCG TGACGCACGT CGAAAACGAC
GACGCCGAGT TCATCGTCCC GAACCAGCGC GTCTTCCAAT CAGGCGTCAC CCGCTTCAGG
TGA
 
Protein sequence
MVDIPDLIRT LFSEETAVVV AIFVLFIGTV LSYLVWRMTH SVLEQAGIPE AVEGTVFERT 
LQNVGFSTVG LVAQLAAIFV YALAIFIAIQ TAQLNYPTQF WAGFSAYLSQ LFIAALAVIA
GLILGDKASL AVSERLRSIK LPQIYVLAPL VKYSIFYVAA LVALGQLGVA TTALLVLLSV
YVFGILFLGG LAFKHLLAAG AAGIYLLLSE PYSIGDEVEI GDRRGVVQEI DMFVTHVEND
DAEFIVPNQR VFQSGVTRFR