Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Huta_0298 |
Symbol | |
ID | 8382562 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Halorhabdus utahensis DSM 12940 |
Kingdom | Archaea |
Replicon accession | NC_013158 |
Strand | + |
Start bp | 281360 |
End bp | 283777 |
Gene Length | 2418 bp |
Protein Length | 805 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644971357 |
Product | hypothetical protein |
Protein accession | YP_003129218 |
Protein GI | 257051385 |
COG category | [S] Function unknown |
COG ID | [COG3002] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0661924 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGTACTG AAGACACCAT CGAAAACAGC ATCGAGAAGG CGGCGGCTAC CGTCGGGTCC GCCTGGCCGA TCCACTCGTT CGTCACAGCC AACCCGCTAT CGGGCTTCGA GGACACGCCC TTCGAGAAGG CAGTCCGACA AGCGGCCGAC CTGCTCGGCG GCCGTGGCTA CCCCGATCCG GAGACGTTCC GGGCCGCCCT CGACGACGGC CGGATCGACC GCGAGATACT CGAAGCCGAG CTCGCCGAGC GCGGATACGC GGCGGACCCG GAGTCGTTAC TCGACCGCAT GGACGTGACC GGGACGTCCG ACCGGAGGAA AACGAGGACG TCCGACGGTG CGGCCGAGCG TGTCGATCAC GTCCTGACCA AGTGGCTCTC GGCGTTCCTC GACGAGGGAC ACGCCGAGTG GTCGATGCCC GACCGCGAAG CGGGGTTCTA CGCCGCGTTC CGTGCGGTAG CGTCACACGA CACACAGATC CCCGAGACCG GACTCGTCGC CGACCTACCC GAGAACGCTC ACGACGCCAT CGCGGCCATA CTGGAGTCGT ATTCGAAGAG TCAGTGGGTC CCCATCTTCG AGGAGCAACT GGCCGCGTTG CCCGGCTGGA CCGGATTCAT CAAACGTCGC GCCGAGGACG GTGACGTCTG GCAGTCGACT GCCCCCAGCA CGCTGGCGGA CTATCTGGCC GTCCGACTCA CACTCTGTGA CGCTTTCAGC GTCGACATCG AGCCGTCGAT CGATCCCGGG AGCGAGGCCG ACGCGAACGA CGATGTCGCC ACGGCGTTCC TGCGGGCCTG GGAGCGGAGT TACCGGAGCG AACTCCTCGA AGGCGTCGCG ACCGAGAGTC GGTCGGTCGC CGGGACCGAT CCGTCGGGAC GCCCGGCCGC CCAACTGGTC TTCTGTATCG ACACGCGTTC GGAGGTCATC CGCCGGCACG TCGAGGCCAC GGGCGACTAT GAGACCCACG GCTATGCGGG CTTTTTCGGC GTCCCGATGG AGTACCAGGG CTTCGACGCC GAGCGCTCGG TCGACGCCTG TCCTCCGATC GTCGATCCAC AGCACCGCGT CACGGAGCTG CCGACAGAGA CGGAGGCGAG GGCCCGTCAC GATCGCTGGG CGCGGCTCCG CGCGGCCGCC GGCGACCTCG TCGAGACGCT GACGACGAAC CCGGCCACCG CCTTCGGCTT CGTCGAGAAG GCGGGGAGCG GATACGGGCT GTCGCTGGCG GCCCGCACGC TCGTTCCCGC TCGCGTCTCC GACCTCTTCG CGGCCGCCGA CGACGTGACT CCGGACGAAC ACGAGTTCTG TGATCCGCTC GTCGATCACC AGCACACCTA CGCCGGCGAC CTGCCGGTCG GCCTGACCCA TGACGAGCAG GTCGAGTACG CCGCCAGCGC CTTCGAGTTG ATGGGCATCG AGGAGTTCGG CCGCCTGTTC GTCTTCGTCG GCCACGCCGC CGAGACGACC AACAACCCTT TCGATTCGAG CCTGGACTGT GGGGCCTGCG CCGGCAACCC CGGCGGCCCC AACGCCCGGG TCCTCGCGAC GATCTGCAAC GACGACGATG TCCGGACCGC GCTGTGCGAG CGTGGGGTCG AACTCCCCGA AGACACCGTC TTCCTCGCCG GCGAGCACAA CACGACCACC GACGAGATCA CCCTCTTCGA CGACGCTGTC CCCGAGAGTC ACGCCGAGGA CCTCGCTCAG TTGCGCGAGG ATCTGGCTAC CGCTCGCGAA GGTGCCGCCG CCGAGCGCGC CGCGTCGATG AGTGCGGCGG GGATCGCAGG TGTCGCCGAG ACCGAGCGCC GCGCGTCCGA CTGGGCGGAG ACGCGTCCCG AGTGGGGATT GGCCGGCAAC GCCGGCTTCG TGATCGGCCC CCGCGAGTTG ACGAACGATC TCGACCTCGA GGGCCGTACG TTCCTTCACT CGTACGATCA CACGACGGAC CCCGACGGCG ACGCTCTCGC GGCGATCCTT ACCGGTCCGA TGGTCGTCAC GCAGTGGATC AACGCCCAGT ACTACTTCTC GACGGTCGAC CCTGCCGTCT ACGGCAGCGG CTCGAAGATA ACCCACAACC CTGTCGGCAA CGTCGGCGTC TACCAGGGCA ACGGCGGCGA TCTGATGACC GGCCTCCCGC TGCAGTCGCT GTTTGGGGCC GCCGAGGAGC CCTACCACCA GCCGCTTCGC CTCTCGACGG TCGTCCACGC GCCGGTCGAC CGCGTCACTG CGGTCCTGGC CGATCACGGG GAACTGCAGG AACTACTGGA CAACGACTGG CTGTCGATGT CTGTCGTCGA TCCGGCCCGG GACCACCGTG TCTTCCACTA CGACGGACAA TGCACCTGGA CGCCGGCGAC CGAACCGATC GCGGACGAAC CGATGGTCCC GGACGCGCCC GCTGTCGGGG ACGATTGA
|
Protein sequence | MSTEDTIENS IEKAAATVGS AWPIHSFVTA NPLSGFEDTP FEKAVRQAAD LLGGRGYPDP ETFRAALDDG RIDREILEAE LAERGYAADP ESLLDRMDVT GTSDRRKTRT SDGAAERVDH VLTKWLSAFL DEGHAEWSMP DREAGFYAAF RAVASHDTQI PETGLVADLP ENAHDAIAAI LESYSKSQWV PIFEEQLAAL PGWTGFIKRR AEDGDVWQST APSTLADYLA VRLTLCDAFS VDIEPSIDPG SEADANDDVA TAFLRAWERS YRSELLEGVA TESRSVAGTD PSGRPAAQLV FCIDTRSEVI RRHVEATGDY ETHGYAGFFG VPMEYQGFDA ERSVDACPPI VDPQHRVTEL PTETEARARH DRWARLRAAA GDLVETLTTN PATAFGFVEK AGSGYGLSLA ARTLVPARVS DLFAAADDVT PDEHEFCDPL VDHQHTYAGD LPVGLTHDEQ VEYAASAFEL MGIEEFGRLF VFVGHAAETT NNPFDSSLDC GACAGNPGGP NARVLATICN DDDVRTALCE RGVELPEDTV FLAGEHNTTT DEITLFDDAV PESHAEDLAQ LREDLATARE GAAAERAASM SAAGIAGVAE TERRASDWAE TRPEWGLAGN AGFVIGPREL TNDLDLEGRT FLHSYDHTTD PDGDALAAIL TGPMVVTQWI NAQYYFSTVD PAVYGSGSKI THNPVGNVGV YQGNGGDLMT GLPLQSLFGA AEEPYHQPLR LSTVVHAPVD RVTAVLADHG ELQELLDNDW LSMSVVDPAR DHRVFHYDGQ CTWTPATEPI ADEPMVPDAP AVGDD
|
| |