Gene Huta_0296 details

Gene Information

• Locus tag: Huta_0296
• ID: 8382560
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 279089
• End bp: 279574
• Gene Length: 486 bp
• Protein Length: 161 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 644971355
• Product: putative transcriptional regulator, AsnC family
• Protein accession: YP_003129216
• Protein GI: 257051383
• COG category: [K] Transcription
• COG ID: [COG1522] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000616302
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGTGAGA CTGAGATAGA CAACGTCGAC AAAGCGATCC TCTATGCGCT CCAGGAGGAC 
GCCCGGAACA TGTCCTCGGC TGACATCGCC GAACGAACCG GGACCTCCGA CAGCACCGTC 
CGCAAGCGCA TCCAGCGACT CGAAGCCGAC GACGTGATCA AGGATTATAG CGCCCGCGTC 
GACTACCAGC AATCGGGTTA TCCGCTCCGG ATGTTGCTGT ACTGTACCGC GTCGATCCCC 
GAACGCGGGG ACCTGATTCC CGACATTCTG GCTATCGACG GCGTCGTCTC CGTCCAGGAA 
CTGGTCACCG GTGAACAGAA CCTGCTCGTC ACCGTCGTCG GCGAGTCCGA CAGCGACATT 
ACGCCCGTTG CCCAGGAACT GCTCGACATG GGACTGACTG TCGCCGACGA GGTCCTCGTT 
CGAGCCCACG AGACGACGCC GTTCGGCAAG TTCGACTCCG GAGCCACGAC TGCAGACGAT 
TCCTGA 

 

Protein sequence

MGETEIDNVD KAILYALQED ARNMSSADIA ERTGTSDSTV RKRIQRLEAD DVIKDYSARV 
DYQQSGYPLR MLLYCTASIP ERGDLIPDIL AIDGVVSVQE LVTGEQNLLV TVVGESDSDI 
TPVAQELLDM GLTVADEVLV RAHETTPFGK FDSGATTADD S