| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0274 |
|---|
| Symbol | |
|---|
| ID | 8382538 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 263847 |
|---|
| End bp | 264623 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 644971334 |
|---|
| Product | 5-carboxymethyl-2-hydroxymuconateDelta- isomerase |
|---|
| Protein accession | YP_003129195 |
|---|
| Protein GI | 257051362 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG TCCGCTTTCG TGACCCGGCA GGAACGATTC GGGGGGGACG GTGGGTCGTC
GAGGACGGGG AGGCGTACGT CACTACTGCA CTCGGAGCAT CCGACCCCGT CGCGGCGGAC
GACCGAACGT ATCGGGCCAG CGACGTCGAC GTACTCGCAC CGGCTCAGCC GACGAAAATC
GTCTGCATCG GGCGGAACTT CGTCGACCAT GCTGACGAAC AGGACGCCGA CGTCCCGGAC
CGCCCGCTGC TGTTCTTGAA GCCACCGAAC ACCGTCGCCA GCCACGGCTC GACGGTCTCG
CTTTTGGCCG GCAAGGAACG CATCGACCAC GAGGCCGAAC TCGCGGTCGT GATCGGTGAG
ACTTGTCACG ACGTGGACGC AAGCGACGCT GAAGACGTGA TCGCGGGCTA CACCTGCTTC
AACGACCTCT CGAACCGCGA CGATCAGCGT GTCGAGACCA ACTGGGTCCG CGGCAAAGCC
TTCGACAACG CCGCGCCGAT GGGGCCGGTG CTCGCGACGC CCGAGGAGGT GCCGGCGGAC
GCGAGCATCG AACTCCGGGT GAACGGTGAG ACGCGACAGT CGGGGAGTCG CGAGGACATG
GTGTTCTCGG TGCCCGAACT GATCGCCGAG ATCACCGACT ACATGACCCT CGAACCCGGC
GACGTGATCG CGACGGGCAC GCCGGCCGGC GTCGGCCCGC TCGAAAACGG CGACACGGTC
GAGATCGAGA TCGAAGGGAT CGGGACGCTC GAACACGGCG TCCACATCCC CGAGTGA
|
|---|
| Protein sequence | MKRVRFRDPA GTIRGGRWVV EDGEAYVTTA LGASDPVAAD DRTYRASDVD VLAPAQPTKI
VCIGRNFVDH ADEQDADVPD RPLLFLKPPN TVASHGSTVS LLAGKERIDH EAELAVVIGE
TCHDVDASDA EDVIAGYTCF NDLSNRDDQR VETNWVRGKA FDNAAPMGPV LATPEEVPAD
ASIELRVNGE TRQSGSREDM VFSVPELIAE ITDYMTLEPG DVIATGTPAG VGPLENGDTV
EIEIEGIGTL EHGVHIPE
|
|---|
| |