Gene Huta_0269 details

Gene Information

• Locus tag: Huta_0269
• ID: 8382533
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Halorhabdus utahensis DSM 12940
• Kingdom: Archaea
• Replicon accession: NC_013158
• Strand: +
• Start bp: 259898
• End bp: 260326
• Gene Length: 429 bp
• Protein Length: 142 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644971329
• Product: transcriptional regulator NikR, CopG family
• Protein accession: YP_003129190
• Protein GI: 257051357
• COG category: [K] Transcription
• COG ID: [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.38556
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTGTTG TCAGTGTCTC GATGCCCGAG GAGTTGCTCG AACGGATCGA TCAGTTCGCG 
GAAGATCATG GCTATACCGG TCGGAGCGAA GTGTTCCGGG AAGCGAGTCG GAATCTCCTC 
AATGAGTTCG AAGATCAATC CCTCGAGGGA CGAGCGTTGA TGGGCGTCGT GACTGTGGTC 
TTCGAATACG AGACGACGAA CGTCGAAGAG AAGATGATGC GACTCCGCCA CGACCACGAA 
GAACTGGTCG CCTCGAATTT CCACAGCCAC GTGGGTGGCC GTCACTGTAT GGAGCTGTTC 
GTCCTCGAAG GCACGCTAGA AGCTATTTCG ACGTTCGTCG GGAAGATCCG TGCCACGAAG 
GATACGCTCA CGATCGATTA CTCGGTCCAC CCCGTCGACG ATTTCGGGGC GCTGGCCGAC 
ATCTCATGA 

 

Protein sequence

MSVVSVSMPE ELLERIDQFA EDHGYTGRSE VFREASRNLL NEFEDQSLEG RALMGVVTVV 
FEYETTNVEE KMMRLRHDHE ELVASNFHSH VGGRHCMELF VLEGTLEAIS TFVGKIRATK 
DTLTIDYSVH PVDDFGALAD IS