| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0261 |
|---|
| Symbol | |
|---|
| ID | 8382524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 251401 |
|---|
| End bp | 253374 |
|---|
| Gene Length | 1974 bp |
|---|
| Protein Length | 657 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 644971320 |
|---|
| Product | multi-sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_003129182 |
|---|
| Protein GI | 257051349 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.514383 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGAGA CGATCCGCGT CCTCCTCGTT GCGGGCAGCG TGGACGCGGA AACCGCGCCG
GCGACAGCTC TCGAACGTGT TGCCGATCGA CTCGCCGTCG AGAGTGTGCC GGACGCCGAT
GCTGGAGTGG ACGCTCTCGC CGCTTCCGGG TACCATTGTG TCGTCGCCAG CGACGACATC
CCTGACACGA CCGGAATCGA GTTCTTCGAG GCCGTCCGGG CGGACCATCC AGATCTCCCG
TTCGTTTTGA TCACTGATGT GGACTCCCCG GCCGCCGCCA GCGAGGCGAT TTCCGCGGGC
GTGACGGACT ACGTACGGCG GCCCGATGGG CCGGACGCCT ACAGCGAACT TGCAACGCGG
ATCGTCACCG CCGTCGAGCA GCGTCGACAA CGACCAGCGG GCGATCCCCC ACCTTCGCTC
TCCACGGCTG CGGGCGGCGC GCGTCTGGCA GAACTCGAGC GCACGGAGGC CCGCTTCGAG
GCGCTGACCG GGCAGACGAC GCTTGGCGTC CTGACTATCG ACGAGGATAG CATTATTCAG
TATGCGAACG ATGCGATCAC AGAATTGTCC GGCTATACGC CAGGGGAACT GGTCGGCGAG
TCACTCCATA CCATTATGCC CGAACGGTTT CACGACGAGC ATACGGCGGC GATCTCTCGG
TATCTCGAAG CCGGCCAGCG CCAACTCGAC TGGGACTGGA TCGAACTGCC GGGTCGCCAT
CGCGACGGGA CGGAAATCCC GCTGGGCATC TCCTTCGGCG AGACGACGAT CGACGGCGAC
CATCGCTTTA CCGGGATTGT CCGTGATATC TCCGAACGGA AGGAACAGGA GCGCCAGCGC
GAGGCGACGG TCGATCTGCT CCAAGAACTC TACGAGATCA CGGCCGACAC CGACCGGTCG
TTCGAACAGA AGGTAACCCG ATTGCTCGAA CTGGGGTGTG AACATTTGGA TCTCGCGTAT
GGCTTTCTCT CCCAGATCAA ACCGGGATCG AACGGTGATT TGGAGTCCGG AACACAGCGG
ATCGTCTATG CACACGGTGA TCACGCGCTC CTCCAACCTG GAGAGACGTG TCCGCTCTCC
GAGGCATACT GTCGCAAAAC GATACAGGCC GACGATTTAC TCGTGATCGC TGACGCCGTC
GAAGCCGGGT GGGAAAGCGA TCCAGCCTAC GAGGTGTTCG AACTGGGTAG TTACGTTGGT
GGGAAAGTCG TTGCGAACGG TGAACTGTAT GGCACGTTTT GTTTTGCCTC GAGTGAGCCG
CGCGAGCAAC CGTTCACCGA CGCCGAGCAG ACCATCGTTC GATTGATGAG CAAGTGGGTT
GGTTATGAAC TCGAACACGG CCTGGTCACC ACTGAACTCG AACGCCAGAA CGAGCGCGTC
GACGAGTTCG CCAGCGTCCT GGCCCACGAC CTGCGAAACC CGTTAAACGT GGCGGTGGGA
CGTCTCGACC TGCTCCGGAC GGAGTGTAAC AGCGACCAGC TGGACGATGT CGCGGACGCC
CTCGATCGGA TGGACGCGCT GATCGACGAT GTCCTGACGC TTGCACAGGG CGGCCAGACC
GTCACCGAGA CGGGAGCTGT TGAGCTATCG ACGATCGCCG CGGAGTCCTG GGAGACCGTC
AAGACGGAGG GGGCGACGCT TCGAACCGAG GGGAACGTAA CTCTGCAGGC TGAACGGAGC
CGGCTCCGAC AGCTCCTTGA GAATTTCTTC CGCAATTCGA TCGACCACGT CGGCGAGGAC
GTGACTATCA CCGTCGGGGA TGTCGAGAAC GGGTTTTTCG TCGCGGACGA CGGGCCGGGC
ATCCCAGAGG AGGAGCGCGC GGATGTCTTC GAGAGCGGTT TCACGACCGC CGAAGACGGC
ACCGGGTTCG GCCTCGCGAT CGTCCGGGAG ATCGTCCAGG CCCACGACTG GACGATCACG
GTCACCGAGA GCGAGTCCGG CGGTGCCCGT TTCGAGATCA TGACCGGGGC GTGA
|
|---|
| Protein sequence | MVETIRVLLV AGSVDAETAP ATALERVADR LAVESVPDAD AGVDALAASG YHCVVASDDI
PDTTGIEFFE AVRADHPDLP FVLITDVDSP AAASEAISAG VTDYVRRPDG PDAYSELATR
IVTAVEQRRQ RPAGDPPPSL STAAGGARLA ELERTEARFE ALTGQTTLGV LTIDEDSIIQ
YANDAITELS GYTPGELVGE SLHTIMPERF HDEHTAAISR YLEAGQRQLD WDWIELPGRH
RDGTEIPLGI SFGETTIDGD HRFTGIVRDI SERKEQERQR EATVDLLQEL YEITADTDRS
FEQKVTRLLE LGCEHLDLAY GFLSQIKPGS NGDLESGTQR IVYAHGDHAL LQPGETCPLS
EAYCRKTIQA DDLLVIADAV EAGWESDPAY EVFELGSYVG GKVVANGELY GTFCFASSEP
REQPFTDAEQ TIVRLMSKWV GYELEHGLVT TELERQNERV DEFASVLAHD LRNPLNVAVG
RLDLLRTECN SDQLDDVADA LDRMDALIDD VLTLAQGGQT VTETGAVELS TIAAESWETV
KTEGATLRTE GNVTLQAERS RLRQLLENFF RNSIDHVGED VTITVGDVEN GFFVADDGPG
IPEEERADVF ESGFTTAEDG TGFGLAIVRE IVQAHDWTIT VTESESGGAR FEIMTGA
|
|---|
| |