Gene Huta_0257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0257 
Symbol 
ID8382520 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp248050 
End bp249243 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content64% 
IMG OID644971316 
Productbeta-lactamase domain protein 
Protein accessionYP_003129178 
Protein GI257051345 
COG category[P] Inorganic ion transport and metabolism
[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases
[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGACG TCGACTTCCC GACACCAGCG GAAACAGCGG AGACAATCAC TCCGAAAGCC 
CTCAAATCCC GGATCGATGC CGGAGAGGCA GTCACGATCC TAGACGTTCG GATGGGAAGC
GAGTACGAGA AGTGGCATAT CGACGGGGAC TCAGTCGAGA CAATCAACGT GCCGTACTAC
GAATTCCTCG ACGACGATAT CAGTGGAGAC GTCTTTGATT CGATCCCCGA CGATCGAACG
GTTACGGTCG TGTGTGCGAA GGGAGAAGCC AGCGAGTACA TTGCCGGTGT GCTCAAAGCG
CGTGGCTACG ACGCCCAAAG CGTTGCCGAG GGGATGAACG GCTGGGCGGA GATCTACGAG
GCCGTCGAAG TCGAGGGCCA CGACGGCCCT GGCACGGTCT TGCAGTATCA GCGACCCTCT
AGCGGCTGTC TGGGATACCT CGTCGTCGAC GGCGACGAGG CCGCAGTCAT CGATCCGCTC
CGTGCGTTCA CTGATCGGTA TCTCGACGAC GCCGAGGACC ACGATGCGGA TCTCGTCTAC
GCACTGGATA CTCACGTCCA CGCAGACCAC GTCTCCGGGA TCCGTGCGCT CGCAGACGCG
GGGGTCGAGG CAGTCCTGCC AGCGGCGGCG ATCGACCGCG GCGTCGAAGA CGCAGACGAC
CTGACTGCCG CCGAGGACGG CGACGTCTTC ACCATCGGCG ACGTCGAGAT TGAAGCGATC
CACACACCCG GGCACACGAC CGGCATGACC TCTTATCTCG TGGGCGACGC GCTGCTCGCG
ACCGGCGACG GCCTGTTCGT CGAAAGCGTC GCCCGACCGG ACCTGGAAGC CGGCGACGAT
GGGGCCGAGG ACGCCGCTCG GCAACTCTAC GAGACCCTAC AAGATCGGAT CTTGACGCTA
GCGGACGACG TGCTCATCGC CGGTGGGCAC ACCAGCGACG CGGCCGAGCC AGCTGCCGAC
GGCACCTACA CCGCGCCGCT TGGGGATCTC CGTGCGGAGA TGGAGGCCCT CTCGATGGAC
GAAGACGATT TCGTCGAGTT GATCCTGGCG GACATGCCGC CCCGGCCGGC CAACTTCGAG
GACATCATCG CGACCAACCT GGGTCAGAAC TGGATCGACG ACGAGGAAGC GTTCACGCTG
GAGCTCGGTC CGAACAACTG CGCGGCCAGC CAGGATTCAC TCGCCGGGGA CTGA
 
Protein sequence
MADVDFPTPA ETAETITPKA LKSRIDAGEA VTILDVRMGS EYEKWHIDGD SVETINVPYY 
EFLDDDISGD VFDSIPDDRT VTVVCAKGEA SEYIAGVLKA RGYDAQSVAE GMNGWAEIYE
AVEVEGHDGP GTVLQYQRPS SGCLGYLVVD GDEAAVIDPL RAFTDRYLDD AEDHDADLVY
ALDTHVHADH VSGIRALADA GVEAVLPAAA IDRGVEDADD LTAAEDGDVF TIGDVEIEAI
HTPGHTTGMT SYLVGDALLA TGDGLFVESV ARPDLEAGDD GAEDAARQLY ETLQDRILTL
ADDVLIAGGH TSDAAEPAAD GTYTAPLGDL RAEMEALSMD EDDFVELILA DMPPRPANFE
DIIATNLGQN WIDDEEAFTL ELGPNNCAAS QDSLAGD