| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0253 |
|---|
| Symbol | |
|---|
| ID | 8382516 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | - |
|---|
| Start bp | 243553 |
|---|
| End bp | 245319 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644971312 |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003129174 |
|---|
| Protein GI | 257051341 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCC GGACAACGCT GTTTAGTGTT TTGGTCCTCA TCGCGCTCGT TCTGTCCGGG
ACGATTTTTG TTGGATTTAC ATTACATAAA ACTGACGTGC GTGCTCAGGA GCGACAGGCA
GTCGAACAGA CGGCCACTGT CGTCGCGGAT CGGATCGACA CCTGGGTCGA AACGACGGCG
ACGTCCGTCG AGCTCTGGGC GACGACGATC GACGTCACCG GGACACCCAG TCAACAGCGA
CTGCTCGAGA CGTTTATCGA TCGAACCGAT TTCGACAGTA CCAGCATCTA CAGTGCCGAG
GGCGCGCTGG TTTCGATCGC CGGCTCGGAT CTCACCTCGG CGGAACGGGC TGCCCTCGTC
GGAAACAATT ATTCCTCACG GGCATTCATG CAGCGCCCGC TCGCCGGGGA GACGTACGTC
AGCGACGTCG ATCAGACGCT CGACGGGGAC TACGTCATTC GGATCGCAGC CCCGATCTGG
GGCGCGAACG AGAGCGTTAC TGGCGTCTTC AGCGGGAACA TCGAGATCGG ACCGACGTCA
CTGTTTGGCA ACGTGACTGA CGTCAGCCGC TCGAGAGAGT CCGTCACGGT TACAGCCGAC
GACCAGACGC TGTTCAGCGA CGCCGGGACC GTTCGCGACC CGATCACGGC GAACGCGACG
GTAACGCGAA CCGGCTGGAT CGTCAGCGTC GCCCGACCGA CCGCGACAAT CGCCGGCCAG
TTGCGGGTTG CGACGATGAT GCAGATCAGT GGCGTCGCCG TGGCGTTGCT CTCGATCGCG
GTCGTCGGCC TCTGGGTGTC CCGGACGACG TTCGCGCAGA TTCAGGAACT CAGTACCGCA
CTCAAGACGC TTGAATCCGG CGAGTATCGG ACGGACCTCG ACCTGGGTTC GATCGACGAA
TGGCGACGCA TCAGCGGGCG GTTCAACACC GTCTCGGAGA TGCTCAAACA GCGTGACTCA
CAGCTAAGGG TCCTGAATCG CGTCCTGCGA CACAACCTCC GCAACGATAT GAACGTCGTT
ACCTCTCACA CCGAGCGGAT TCTCGCCGAC GAGGACGTCC CCGACACTGT CGAATCCGAT
CTGGAAAAGA TCCATTCGAC AGCTCTGAGA CTGATAAATA CGAGCGAACA CGCTCGAACG
CTCTACGACG ACTTGCTGGC AAAGCCCAAA CAAGCTGTCG GGCCGGTTGA CGTCGTCTCG
ATTGTCGAGG AACGGACCGA AGAACTGGCG TCGCAGTTCC CCGAAGCGAC CATCGAAACC
AACCTGCCGG CGACGGCCCT GGCGCTCGAC TCGGCGACGC TTCCGATCGT GATCGAGGAG
ATCGTCCGGA ATGCACTCAT CCACAACGAC TTGCCCGAAT CGGAGCAACA GGTCACGGTT
TCCGTCTGCC GTCAAGACCC TGCGCGTGCC GCCGTGGGGG CGAACACGGA GGTCCGGATC
GACATCGCGG ACAATGGTCC CGGAATTCCG ATGGTCGAGG AAGCGCTGTT GACCAACCAG
CTCGAAGAGA CGTCGATCGA TCACGGCAGT GGCCTCGGCG TCTGGCTGGT CAACTGGCTC
GTCGACCAGA TCGGCGGCAC CGTCTCAGTT CACACCGGTG TCGAACGCGG AACGACAGTC
TCGATTCACG TCCCCGCTGC GGAGGAACCA CCGGAACCTG GGGCTGATAC CGACACGAGT
GATCCAGGCG GCAGTGGTTC TGCCCACGGT GAGGACAGTA TTCGCGACGG TTTGAGTGAC
GTTGCAGACG AGAACGGGGC ATCCTAG
|
|---|
| Protein sequence | MRLRTTLFSV LVLIALVLSG TIFVGFTLHK TDVRAQERQA VEQTATVVAD RIDTWVETTA
TSVELWATTI DVTGTPSQQR LLETFIDRTD FDSTSIYSAE GALVSIAGSD LTSAERAALV
GNNYSSRAFM QRPLAGETYV SDVDQTLDGD YVIRIAAPIW GANESVTGVF SGNIEIGPTS
LFGNVTDVSR SRESVTVTAD DQTLFSDAGT VRDPITANAT VTRTGWIVSV ARPTATIAGQ
LRVATMMQIS GVAVALLSIA VVGLWVSRTT FAQIQELSTA LKTLESGEYR TDLDLGSIDE
WRRISGRFNT VSEMLKQRDS QLRVLNRVLR HNLRNDMNVV TSHTERILAD EDVPDTVESD
LEKIHSTALR LINTSEHART LYDDLLAKPK QAVGPVDVVS IVEERTEELA SQFPEATIET
NLPATALALD SATLPIVIEE IVRNALIHND LPESEQQVTV SVCRQDPARA AVGANTEVRI
DIADNGPGIP MVEEALLTNQ LEETSIDHGS GLGVWLVNWL VDQIGGTVSV HTGVERGTTV
SIHVPAAEEP PEPGADTDTS DPGGSGSAHG EDSIRDGLSD VADENGAS
|
|---|
| |