Gene Huta_0224 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0224 
Symbol 
ID8382486 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand
Start bp221730 
End bp222227 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID644971282 
Productprotein of unknown function DUF88 
Protein accessionYP_003129145 
Protein GI257051312 
COG category[S] Function unknown 
COG ID[COG1432] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.121246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG TTCATCCGGG CCAGCGGGTC GCGGTCCTGG CCGACTCACA GAACCTCTAT 
CACACCGCCC AGAGCCTCTA TCAGCAGAAC ATCGATTACG GGGAACTCCT CGACGCGGCA
GTCCGTGACC GACAGCTCAC GCGCGCCATC GCGTACGTCA TCCGGGCGGA CGCCGACGAC
GAGGAGCGGT TTTTCGACGC CCTGGAAGAC ATCGGCTTCG AGACCAAGGC CAAAGACATC
AAAACATTCG CCGACGGCTC GAAGAAGGCC GACTGGGACG TGGGGATGAG TCTGGATGCC
GTGACGTTGG CCCCGCACGT CGATACGATC GCACTGTGTA CCGGTGACGG CGACTTCGCC
CGGCTGGTCA CACACGTCAG ACACGAAGGC GTCCGCGTCG AAGTGCTGAG TTTCGGGGAA
TCGACGTCCG AGGAACTCCT CGACGTGGCC GAGGACTACA CGGATCTGAG CGAGGACACC
GAACGCTTCC TGTTGTAG
 
Protein sequence
MTDVHPGQRV AVLADSQNLY HTAQSLYQQN IDYGELLDAA VRDRQLTRAI AYVIRADADD 
EERFFDALED IGFETKAKDI KTFADGSKKA DWDVGMSLDA VTLAPHVDTI ALCTGDGDFA
RLVTHVRHEG VRVEVLSFGE STSEELLDVA EDYTDLSEDT ERFLL