| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0195 |
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| Symbol | |
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| ID | 8382457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 192632 |
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| End bp | 193399 |
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| Gene Length | 768 bp |
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| Protein Length | 255 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 644971253 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_003129116 |
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| Protein GI | 257051283 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00377] anti-anti-sigma factor |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.1074 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACGAAG ACCTGATCGC GACGGCGATC GACGAACTCG AGGACGTCTT TTACATATTC
ACGCCCGAAG GCGAATTCGT CGCCTGGAAC GAGCAGTTGC CGGCGGTCTC CGGATACACT
GACGACGAAC TGGACGAGAT GGAACCGACG GCACTGTTCT CCGGTGACGG GAGCGAGGCC
GTCGCCGACG CGATCGAGAC CGTGATCAAG AACCGGCGTC GAACGGCCGT TCAGGCCAAC
CTCGAAACGA AAAGCGGGAC GGAGATCCCC TACGAACTCT CGGTATCGCC GTTGATCGAG
GACGACGAAC TCCGCGTGAT CGTGGGTATC GGCAGGGACA TTACCGATCG CCTGGAGAAC
GAACGCCGGC TCCAGCGGAT GGCCGAGGAG ATCCGTAACC TCTCGATGCC GGTCGTCGAG
ATCTGGGACG GCGTCATTCT GACCACGGTC GTCGGCTCGC TCGATACGGC GAAAGCCGAG
CGGTTGACCG AGGAACTCCT CGATCGGATC GTCGAGGCCG AAGCGTCTGT CGCGCTGATC
GACATCACCG GCGTGGCGGC GATCGATACG GCGACGGCCC AGCATCTCAT CGACACGATC
AACGCCGTGA ATCTGCTCGG TGCCCGCGTC GTCATCACTG GCATCAGTCC GGACATCGCC
CAGACCCTCG TACAGCTCGG CGTCGAACTC GATGACGTCG AGACGCGCTC GTCACTGATG
GATGGCCTCC AGGTCGCACT CTCCTGGCAA GGGGTGACGT TCGAGTGA
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| Protein sequence | MNEDLIATAI DELEDVFYIF TPEGEFVAWN EQLPAVSGYT DDELDEMEPT ALFSGDGSEA
VADAIETVIK NRRRTAVQAN LETKSGTEIP YELSVSPLIE DDELRVIVGI GRDITDRLEN
ERRLQRMAEE IRNLSMPVVE IWDGVILTTV VGSLDTAKAE RLTEELLDRI VEAEASVALI
DITGVAAIDT ATAQHLIDTI NAVNLLGARV VITGISPDIA QTLVQLGVEL DDVETRSSLM
DGLQVALSWQ GVTFE
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