| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0186 |
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| Symbol | |
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| ID | 8382448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | - |
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| Start bp | 183980 |
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| End bp | 186244 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644971244 |
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| Product | AAA family ATPase, CDC48 subfamily |
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| Protein accession | YP_003129107 |
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| Protein GI | 257051274 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0464] ATPases of the AAA+ class |
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| TIGRFAM ID | [TIGR01243] AAA family ATPase, CDC48 subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.735425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA CCGTCAAACC ACTCAAACAG AAGGACGCCG GTCGTGGGCT GGCCGCGATC
GATCGGGCGG CGATGGAGCA ACTCGACCTG GAGAACGGCG ACTACGTCGT TCTCGAGGGG
CGCGAGGGAC GGGCTGTTGC CCGTGTCTGG CCCGGGTATC CCGAGGACAC CGGCGACGGC
GTCGTCCGGA TCGACGGGCA GCTCCGACAG GAAGCGGACG TCGGCATCGA CGACCGGATC
GACGTCGAGA AGGCCGACGT CAAACCCGCC CGCTCGATCT CGGTCGCCCT TCCCCAGAAC
CTCCGCGTCC GCGGAAACAT CGGCCCGCAC GTCCGGAACA AGCTCTCCGG GCAGGCAGTC
ACGACAGGCC AAACTGTGCC GTTCTCGCTC GGGCTCGGCC CGGTCTCCAG TGTCGGTGGC
CAGAAGATCC CGCTGAAGAT TGCCGAGACC GATCCCGAGG GGACGGTCGT CGTCACCGAG
CAAACCGAGA TCGAGGTCAG CCAACAGCCC GCCGAGCAGA TCACCGGCGA GGCACCCGAG
GACGCCCGCG GGACGCCCGA CGTGACCTAC GAGGACATCG GCGGGCTCGA CGACGAGCTA
GAGCAGGTCC GGGAGATGAT CGAGTTGCCG ATGCGCCACC CCGAGCTGTT CAACCAGCTG
GGCATCGAGC CGCCGAAGGG CGTCCTCCTG CACGGGCCGC CCGGCACCGG CAAGACGCTG
ATGGCCAAAG CCGTCGCCAA CGAGATCGAC GCCTACTTCA CCACGATCTC GGGCCCGGAG
ATCATGTCGA AGTACTACGG CGAGAGCGAA GAGCAGTTGC GGGAGATGTT CGACGAGGCC
GAGGAGAACG CCCCGGCGAT CGTCTTCATC GACGAGATCG ACTCCATCGC CCCCAAGCGT
GATGACACGA GCGGCGATGT CGAACGCCGC GTCGTCGCCC AACTCCTCAG CCTCATGGAC
GGCCTCGAGG AGCGCGGCGA CGTGATCGTC ATCGGCGCGA CCAACCGACT TGATGCGCTC
GACCCCGCCC TCCGTCGTGG CGGTCGCTTC GATCGCGAGA TCGAGATCGG GGTGCCCGAT
AAAAAGGGTC GCAAAGAAGT CCTGCAGGTT CACACCCGCG GGATGCCGTT GAACGACGGG
ATCGACATCG ACGAATACGC CGAACGGACC CACGGCTTCG TCGGTGCGGA CCTCGAACAA
CTCGCCAAAG AGGGGGCGAT GAACGCGCTT CGCCGGATCC GTCCGGAGAT CGATCTCGAA
GCCGACGAGA TCGACGCCGA GATCCTCGAA TCCCTGGAAA TCACTGAAGA CGATTTCAAG
GCGGCACTGA AGGGGATCGA ACCCTCGGCG CTCCGGGAAG TGTTCGTCGA GGTGCCCGAC
GTCTCCTGGG AAGATGTCGG CGGGCTCGAA GACACCACCG AACGCCTCAG AGAGACCATC
CAGTGGCCCC TGGAGTACCC CGGCGTCTTC GAGCAGATGG ACATGGAGTC CGCCAAGGGC
GTGCTGCTCT ATGGCCCACC AGGCACGGGG AAGACGCTGC TCGCCAAGGC CGTCGCCAAC
GAGGCCCAGA GCAACTTCAT CTCCGTGAAG GGGCCGGAAC TCCTCAACAA GTACGTCGGG
GAGTCCGAGA AGGGCGTCCG CGAAGTCTTC TCGAAGGCGC GTGAGAACGC ACCCACGGTG
GTGTTCTTCG ACGAGATCGA CTCGATCGCG GGCGAGCGGG GGCGCAATAT GGGCGATTCG
GGCGTCGGTG AACGCGTCGT CTCCCAACTG TTGACCGAAC TCGACGGGCT CGAGGATCTG
GAGGACGTCG TCGTGATCGC CACCACGAAC CGCCCGGATC TCATCGACGC CGCGCTCATC
CGACCCGGTC GACTCGACCG ACACATCCAC GTCCCCGTGC CCGACGAGGA CGCGCGCCGG
AAGATCCTCG AGGTGCACAC GCGGGACAAG CCGCTCGCCG AGAGCGTGGA CCTCGACGAC
CTGGCGCGCC GGACCGACGG CTACGTCGGT GCCGATCTGG AGGCCGTCGC CCGCGAGGCT
GCGATGGCCG CCACGCGTGA GTTCATCCGG AGCGTCGATC CCGAAGACGT CGACGACAGC
GTCGGGAACG TCCTGATCGA CGAGAGCCAC TTCGAAACCG CGCTCGGAGA AGTCCAGCCG
AGCGTCGACC GCGAGGTCCG CGAGCGCTAC GAGGAGATCG AACAGCGCTT CGACAAACGC
GAGACTGAAC TCGACGAACC CGAGGTCGGC AAGACCTTCC AGTGA
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| Protein sequence | MKLTVKPLKQ KDAGRGLAAI DRAAMEQLDL ENGDYVVLEG REGRAVARVW PGYPEDTGDG
VVRIDGQLRQ EADVGIDDRI DVEKADVKPA RSISVALPQN LRVRGNIGPH VRNKLSGQAV
TTGQTVPFSL GLGPVSSVGG QKIPLKIAET DPEGTVVVTE QTEIEVSQQP AEQITGEAPE
DARGTPDVTY EDIGGLDDEL EQVREMIELP MRHPELFNQL GIEPPKGVLL HGPPGTGKTL
MAKAVANEID AYFTTISGPE IMSKYYGESE EQLREMFDEA EENAPAIVFI DEIDSIAPKR
DDTSGDVERR VVAQLLSLMD GLEERGDVIV IGATNRLDAL DPALRRGGRF DREIEIGVPD
KKGRKEVLQV HTRGMPLNDG IDIDEYAERT HGFVGADLEQ LAKEGAMNAL RRIRPEIDLE
ADEIDAEILE SLEITEDDFK AALKGIEPSA LREVFVEVPD VSWEDVGGLE DTTERLRETI
QWPLEYPGVF EQMDMESAKG VLLYGPPGTG KTLLAKAVAN EAQSNFISVK GPELLNKYVG
ESEKGVREVF SKARENAPTV VFFDEIDSIA GERGRNMGDS GVGERVVSQL LTELDGLEDL
EDVVVIATTN RPDLIDAALI RPGRLDRHIH VPVPDEDARR KILEVHTRDK PLAESVDLDD
LARRTDGYVG ADLEAVAREA AMAATREFIR SVDPEDVDDS VGNVLIDESH FETALGEVQP
SVDREVRERY EEIEQRFDKR ETELDEPEVG KTFQ
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