Gene Huta_0183 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0183 
Symbol 
ID8382445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand+ 
Start bp182019 
End bp182651 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content63% 
IMG OID644971241 
ProductUracil-DNA glycosylase superfamily 
Protein accessionYP_003129104 
Protein GI257051271 
COG category[L] Replication, recombination and repair 
COG ID[COG1573] Uracil-DNA glycosylase 
TIGRFAM ID[TIGR00758] uracil-DNA glycosylase, family 4 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.589955 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCCGG ACATCCCGGA TCCACGGAAC CCCTACAGCA TGGACGAGGA CTGTACCAAC 
TGCCCGGCGC TGGTCGAGTC ACGGACGCAG GTCGTCCATG GCTACGGCGA CCCGACGGCG 
GACGTGATCG TCCTCGGGTC GGCTCCGACG CCGGGTGCAG ATCGGACCGG CATCCCGTTC 
ACTGGCGACG AGACCGGCGA GACAATACAG GAAATTCTCG GGGCGGTCGG CCTCAGTGAT 
TCCCCACCCG ACACCACTGA ACCTGACCTC ACGGAGGTCT ATCTCACCTA CGTCACGCGG 
TGTCACCACT CGGATCGAAG CGCAACCGAG GAGGAACGGC ACAACTGCGA GGGGTATCGC 
ACGGCGGAAC TTCGCCGGAT CAACCCGGAA CTGATCGTGG CTGTCGGGCA GGAGCCACTG 
GAAGCACTGG CGTTCGAGTA CACGATGGAA AGCGCCGACG AACTGGACGT GACTGCCGAA 
CACGCGACGA CGATCCAGGG CCGCGGATTC GAGATCCTGC CGATGATCGA ACCGGTGGCT 
GCCAGCGAAA GCGAATTGAC AGCCTTCCGC GAGCACTTCG CCGAAGAACT CGACCGGGAT 
TATCGACAGA CAAAGGGGCA ACGCCGGAAG TAG
 
Protein sequence
MSPDIPDPRN PYSMDEDCTN CPALVESRTQ VVHGYGDPTA DVIVLGSAPT PGADRTGIPF 
TGDETGETIQ EILGAVGLSD SPPDTTEPDL TEVYLTYVTR CHHSDRSATE EERHNCEGYR 
TAELRRINPE LIVAVGQEPL EALAFEYTME SADELDVTAE HATTIQGRGF EILPMIEPVA 
ASESELTAFR EHFAEELDRD YRQTKGQRRK