| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0164 |
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| Symbol | |
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| ID | 8382426 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halorhabdus utahensis DSM 12940 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013158 |
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| Strand | + |
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| Start bp | 165178 |
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| End bp | 165696 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644971222 |
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| Product | transcriptional regulator NikR, CopG family |
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| Protein accession | YP_003129085 |
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| Protein GI | 257051252 |
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| COG category | [K] Transcription |
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| COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
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| TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.200645 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCGGCC GGTCAATCGG GTGTATGGCC GACGACCTCG ACAGGGTGAG TCTGACGTTG
CCGCCCGAGA TGACCGACCG CCTCGACGGC ATCGTCACCG AGTGGGACTA CGCGAGCCGA
TCGGAGGCCG TCCGGGACGC GTTGCGTGAC TTCTTCACGA CCTATGAATG GGAGGGCGGC
GACGAGACGC GTCACTACGG CACGATCGTC ATCGCTCACG AGCATGACCA CGACAGCGAC
GTGGCCGGCC GCCTCCAGAC GATCCAACAC GAGTACGCCG ACGTCGTCAC GTCGGTCCAG
CACATCCACC TCTCGGAGGA CCGCTGTATG GAGACGCTCG TGGTCGATGG CACCGCCGGC
CAGATCGACG AACTGGCCAA CCGCCTGCGA GCGATCGGCG GCGTCAAGCA GGTGAAAGTC
GTCGTTGTCG GTAGCGGTGG GTCCGGGGCC GACAAAGTCG ACAGTGATCG GGCGCACAAA
CACGATCACG CGGGCGAGCC GGCCGATCAC GAACACTGA
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| Protein sequence | MTGRSIGCMA DDLDRVSLTL PPEMTDRLDG IVTEWDYASR SEAVRDALRD FFTTYEWEGG
DETRHYGTIV IAHEHDHDSD VAGRLQTIQH EYADVVTSVQ HIHLSEDRCM ETLVVDGTAG
QIDELANRLR AIGGVKQVKV VVVGSGGSGA DKVDSDRAHK HDHAGEPADH EH
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