| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Huta_0132 |
|---|
| Symbol | |
|---|
| ID | 8382394 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Halorhabdus utahensis DSM 12940 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013158 |
|---|
| Strand | + |
|---|
| Start bp | 127893 |
|---|
| End bp | 129806 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 644971190 |
|---|
| Product | DNA gyrase, B subunit |
|---|
| Protein accession | YP_003129053 |
|---|
| Protein GI | 257051220 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
|---|
| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.312038 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGACG ACAACGCCTA CGGGGCCGGC CAAATCCAGG TACTGGAGGG CTTACAAGCC
GTCCAGAAGC GGCCGGCGAT GTACATCGGT TCTACCGACA CCAGGGGATT GCATCACCTC
GTCTACGAGG TGGTCGACAA CGCCATCGAC GAGGCGCTCG CCGGACACTG TGACCACATC
GAGGTCACGA TCCACGACGA CGGATCAGTC TCGGTGACCG ACGACGGCCG GGGGATTCCG
ATCGACATCC ACGAGGAGTA CGACCGGCCA GCCGTCGAAG TCATCATGAC CGTGCTACAC
GCCGGGGGAA AGTTCGACAA CAAGTCCTAC CAGGTCTCGG GAGGGCTCCA CGGCGTCGGT
GTCTCGGTTG TCAATGCCCT CTCCCAGAAG CTCGAAGTCG AAGTAAGCCG GGAAGGCAAC
GTCTGGAAAC AGACGTTCGA TCACGGTGCG CCCGCGGACG ACCTCACCGA GATCCGCTCG
CTCGATGACC CCGATGAGAC GGGGACGACG ATCCGCTTTT GGCCGGACGA AGAGATCTTC
GAGACCACCG ACTTCCAGTT CTCGACGCTC GCGAACCGCC TTCGGGAACT CGCCTTTCTG
AACTCCGGGG TCGAGATCAC GCTCGCTGAC GATCGCGAAG AGCGGGCCGA AACCTTCCAG
TACGAGGGTG GGATCCGGGA GTTCGTCGAG TACCTGAACG AAACCAAAGA TCCGCTGCAC
GACGAAGTCG TCTACTTCGA GGACGAGGAT CAGGACATCC AGGTCGAAGT CGCCCTCCAG
GCGACCACCG AGTTGCAGGG CTCGATTCAC GCGTTCGCGA ACAACATCAA CACCCGCGAG
GGAGGGAGTC ACCTCACCGG CTTCAAAACC GCGTTAACTC GCGTCGTCAA CGATTATGCG
ACCACCAACG ACCTTCTCTC GGACATCGAG GAGACACTCA AAGGGGAGGA CATCCGCGAG
GGGCTGACGG CGGTCATCTC GATCAAACAC CCGGACCCCC AGTTCGAGGG CCAGACGAAG
ACCAAACTCG GCAACAGCGA GGTCCGTGGC GTCGTCGAAA GTGCGATGCA CGAGAATCTC
GGGACGTACT TCGAGGAGAA CCCGGCCGTC GCCCAGGCGA TCGTTCGGAA GGCTGTCGAG
GCCGCCAAAG CCCGCAAGGC CGCACAGAAA GCCGAGGAAC TCACCCGCCG CAAGAGCGCC
CTGGAGTCGA CCGCACTGCC GGGGAAGCTG GCCGACTGTC AGACGAAAGA TCCCAGCCGG
GCGGAGCTGT TCATCGCCGA GGGGGACAGC GCGGGCGGGA GTGCCAAACA GGCCCGAAAT
CCCGATTTCC AGGCCGTCTT ACCCATCCGC GGGAAGATCC TCAACGTCGA GAAACACCGC
CTCGACCGGA TTCTCGAGAA CGAACAGATC CGCAACATCA TCACCGCGCT GGGGACCGGC
GTCGGGGACG AGTTCGATCT CGACGAACTC CGGTACGAGA AGATCATCTT CGCTACTGAC
GCTGACGTCG ACGGCGCACA CATCCGGACA CTGTTGCTCA CGTTTTTCTA TCGACACATG
CGACCGTTGC TCGAGGGAGG CCACGTCTAC GCCGCCCGCC CGCCGCTGTA CCGGATCCGG
TATCGCGGCG AGACCTACGA CGCGATGACC GACGCCGAAC GTGACGAGAT CATCGAGGAG
AAATGCAACG GGAATCCGAC CCAGATCCAG CGGTTCAAGG GCCTGGGGGA GATGAACCCA
CAACAGCTCT GGGATACGAC GATGAATCCC GAGAACCGGT TTCTCAAGCG GATCACGATC
GACGACGCCG CCGCTGCGGA CAAGATGTTC TCCGTGCTGA TGGGTGACGC CGTCGAACCG
CGCAAGCAGT TCATCAAGGA ACACAGCCCC GAAGCTGAAT GGGTCGACAT ATGA
|
|---|
| Protein sequence | MSDDNAYGAG QIQVLEGLQA VQKRPAMYIG STDTRGLHHL VYEVVDNAID EALAGHCDHI
EVTIHDDGSV SVTDDGRGIP IDIHEEYDRP AVEVIMTVLH AGGKFDNKSY QVSGGLHGVG
VSVVNALSQK LEVEVSREGN VWKQTFDHGA PADDLTEIRS LDDPDETGTT IRFWPDEEIF
ETTDFQFSTL ANRLRELAFL NSGVEITLAD DREERAETFQ YEGGIREFVE YLNETKDPLH
DEVVYFEDED QDIQVEVALQ ATTELQGSIH AFANNINTRE GGSHLTGFKT ALTRVVNDYA
TTNDLLSDIE ETLKGEDIRE GLTAVISIKH PDPQFEGQTK TKLGNSEVRG VVESAMHENL
GTYFEENPAV AQAIVRKAVE AAKARKAAQK AEELTRRKSA LESTALPGKL ADCQTKDPSR
AELFIAEGDS AGGSAKQARN PDFQAVLPIR GKILNVEKHR LDRILENEQI RNIITALGTG
VGDEFDLDEL RYEKIIFATD ADVDGAHIRT LLLTFFYRHM RPLLEGGHVY AARPPLYRIR
YRGETYDAMT DAERDEIIEE KCNGNPTQIQ RFKGLGEMNP QQLWDTTMNP ENRFLKRITI
DDAAAADKMF SVLMGDAVEP RKQFIKEHSP EAEWVDI
|
|---|
| |