Gene Huta_0124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHuta_0124 
Symbol 
ID8382386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHalorhabdus utahensis DSM 12940 
KingdomArchaea 
Replicon accessionNC_013158 
Strand- 
Start bp118752 
End bp119435 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content60% 
IMG OID644971182 
Productprotein of unknown function DUF1648 
Protein accessionYP_003129045 
Protein GI257051212 
COG category[S] Function unknown 
COG ID[COG5658] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTGA AACCCGTACT ATCCGACATG AAATCGACAC ATCGGTTCGC TCTGGCGGCT 
GGTCTGGTCG TCGCCTCGGG TGTCGTCAGT GTCCTCGCCG CGCCGGATCT CCCCGAACAG 
ATGGCGACGC ACTGGAACGC CGCTGGTGTG CCCGACGACA CGATGTCGAA GCCAGTCGCC 
CTCGCCCTCA TTCCAATACT GACGGCAGCC CTCCTCGGTA TGTTCGCTGT CATTCCCCGT 
ATCGATCCGC TCGGCGAGAA CATCGCCGAA TTCCGCCCGA TTTACGACTG GTTCGTCGTC 
GGCTTCACGG CGTTCATGGC GATCGTCCAC GGCGGCATCG TCGCGTTCAA CCTCGGCTAC 
GAGTTCGACT TTGTGTTGTT GCTACTGGCA GCTGTGGCCA TTCTCTTCTA TCTCGTCGGT 
GTCCTCCTCG ACCACGTGGA ACGCAACTGG TTCGTCGGCA TTCGTACCCC GTGGACGATG 
AGTAGTCCCG AGGTCTGGGA GCAGACGAAC GCCCTCGGGG CGACGCTCTT CAAACTTACC 
GCGGCGGTGG CACTCGTGGG ACTGCTATTC GGGGAGTACG CAATCTATTT CCTGATCGTC 
CCGGTGCTGG TGACGGCCAG CATCACGGTG GTGTACTCCT ACTACCTGTA TGAGCGCCTT 
GAGGAAGATC CGAGTGACGT GTAA
 
Protein sequence
MTLKPVLSDM KSTHRFALAA GLVVASGVVS VLAAPDLPEQ MATHWNAAGV PDDTMSKPVA 
LALIPILTAA LLGMFAVIPR IDPLGENIAE FRPIYDWFVV GFTAFMAIVH GGIVAFNLGY 
EFDFVLLLLA AVAILFYLVG VLLDHVERNW FVGIRTPWTM SSPEVWEQTN ALGATLFKLT 
AAVALVGLLF GEYAIYFLIV PVLVTASITV VYSYYLYERL EEDPSDV